Variant report

rSNPs within LD-proxies of this variant (count:22)

rs_ID	r²[population]
rs10185560	0.93[CEU][hapmap];1.00[CHB][hapmap];1.00[JPT][hapmap]
rs10189583	1.00[CHB][hapmap]
rs10496855	0.82[CEU][hapmap];1.00[CHB][hapmap];0.83[GIH][hapmap];0.90[TSI][hapmap];0.83[EUR][1000 genomes]
rs12472481	1.00[CEU][hapmap];1.00[CHB][hapmap];1.00[JPT][hapmap]
rs12691580	1.00[CHB][hapmap]
rs12987572	0.82[CEU][hapmap];1.00[CHB][hapmap];0.88[GIH][hapmap];0.90[TSI][hapmap];0.81[EUR][1000 genomes]
rs12989752	1.00[CHB][hapmap];0.82[EUR][1000 genomes]
rs12993423	1.00[CHB][hapmap];0.81[EUR][1000 genomes]
rs12999130	0.82[CEU][hapmap];1.00[CHB][hapmap]
rs13001345	1.00[CHB][hapmap]
rs13006054	1.00[CHB][hapmap]
rs13007335	1.00[CHB][hapmap]
rs13007422	1.00[CHB][hapmap]
rs13013928	1.00[CHB][hapmap]
rs13021153	0.81[EUR][1000 genomes]
rs13022675	1.00[CHB][hapmap]
rs13024879	1.00[CHB][hapmap]
rs13026491	0.80[EUR][1000 genomes]
rs1429346	1.00[CHB][hapmap];1.00[JPT][hapmap]
rs17518049	0.82[CEU][hapmap];1.00[CHB][hapmap];0.82[EUR][1000 genomes]
rs1963862	0.88[ASN][1000 genomes]
rs7562670	0.93[CEU][hapmap];1.00[CHB][hapmap];0.94[GIH][hapmap];0.90[TSI][hapmap];0.94[AMR][1000 genomes];0.94[EUR][1000 genomes];0.81[ASN][1000 genomes]

Variant overlapped rSNPs/rCNVs (count:3 , 50 per page) page: 1

No.	Variant name	Chromosome position	Chromatin state	Related regulatory elements	Target genes	Extended variants	Associated traits
1	nsv583198	chr2:141510791-142150620	Enhancers Weak transcription ZNF genes & repeats Active TSS Flanking Active TSS Bivalent Enhancer Flanking Bivalent TSS/Enh	TF binding region CpG island Chromatin interactive region lncRNA	4 gene(s)	inside rSNPs	diseases
2	nsv1003008	chr2:141518795-141763505	Weak transcription Enhancers Flanking Active TSS Active TSS ZNF genes & repeats Flanking Bivalent TSS/Enh Bivalent Enhancer	TF binding region CpG island Chromatin interactive region lncRNA	2 gene(s)	inside rSNPs	diseases
3	nsv875208	chr2:141657878-141795620	Weak transcription Enhancers Flanking Active TSS Flanking Bivalent TSS/Enh Active TSS Bivalent Enhancer ZNF genes & repeats	TF binding region CpG island Chromatin interactive region	1 gene(s)	inside rSNPs	diseases

No data

Chromatin state (count:1 , 50 per page) page: 1

No.	Chromosome Location	Chromatin state	Cell line	Tissue
1	chr2:141668200-141668600	Enhancers	Fetal Heart	heart

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