Variant report

Variant	rs2391391
Chromosome Location	chr1:95451926-95451927
allele	C/T
Outlinks	Ensembl UCSC

Chromatin state
Related regulatory elements
Target genes
Other information

No.	Distal block	Cell Line	Cell type	Cell Stage
1	chr1:95402811..95405295-chr1:95450498..95453342,2	K562	blood:

rs_ID	r²[population]
rs11165297	0.82[JPT][hapmap]
rs11590106	0.82[JPT][hapmap]
rs12129041	0.88[JPT][hapmap]
rs12751633	0.82[JPT][hapmap]
rs12755096	0.82[JPT][hapmap]
rs12760863	0.82[JPT][hapmap]
rs4131811	0.82[JPT][hapmap]
rs6674604	0.82[JPT][hapmap]
rs6681009	0.80[AMR][1000 genomes];0.85[EUR][1000 genomes];0.89[ASN][1000 genomes]
rs7540821	0.82[JPT][hapmap]

SNP	Gene	Cis/trans	Tissue	Source
rs2391391	FNBP1L	cis	cerebellum	SCAN

Chromatin state (count:54 , 50 per page) page: 1 2

No.	Chromosome Location	Chromatin state	Cell line	Tissue
1	chr1:95429000-95467600	Weak transcription	Stomach Smooth Muscle	stomach
2	chr1:95437600-95455600	Weak transcription	ES-I3 Cell Line	embryonic stem cell
3	chr1:95437800-95455000	Weak transcription	Sigmoid Colon	Sigmoid Colon
4	chr1:95437800-95458400	Weak transcription	Liver	Liver
5	chr1:95446800-95455000	Weak transcription	Left Ventricle	heart
6	chr1:95446800-95457800	Weak transcription	hESC Derived CD184+ Endoderm Cultured Cells	ES cell derived
7	chr1:95447000-95452200	Weak transcription	Fetal Intestine Small	intestine
8	chr1:95447000-95490800	Weak transcription	Fetal Intestine Large	intestine
9	chr1:95447600-95460400	Weak transcription	Rectal Mucosa Donor 31	rectum
10	chr1:95448000-95455000	Weak transcription	Fetal Muscle Trunk	muscle
11	chr1:95448200-95491000	Weak transcription	Primary B cells from cord blood	blood
12	chr1:95448400-95452400	Enhancers	HSMMtube	muscle
13	chr1:95448800-95452400	Weak transcription	Breast variant Human Mammary Epithelial Cells (vHMEC)	Breast
14	chr1:95448800-95455000	Weak transcription	Duodenum Mucosa	Duodenum
15	chr1:95448800-95460000	Weak transcription	Brain Dorsolateral Prefrontal Cortex	brain
16	chr1:95449000-95453600	Weak transcription	Psoas Muscle	Psoas
17	chr1:95449000-95455000	Weak transcription	Breast Myoepithelial Primary Cells	Breast
18	chr1:95449000-95455000	Weak transcription	Brain Hippocampus Middle	brain
19	chr1:95449000-95455000	Weak transcription	Stomach Mucosa	stomach
20	chr1:95449000-95455400	Weak transcription	Brain Angular Gyrus	brain
21	chr1:95449000-95458600	Weak transcription	Right Ventricle	heart
22	chr1:95449000-95460800	Weak transcription	Fetal Kidney	kidney
23	chr1:95449200-95452400	Weak transcription	Primary T cells from cord blood	blood
24	chr1:95449200-95452400	Weak transcription	Foreskin Fibroblast Primary Cells skin01	Skin
25	chr1:95449200-95452400	Weak transcription	HMEC	breast
26	chr1:95449200-95452400	Weak transcription	HSMM	muscle
27	chr1:95449200-95452400	Weak transcription	NH-A	brain
28	chr1:95449200-95452400	Weak transcription	NHLF	lung
29	chr1:95449200-95452600	Weak transcription	IMR90 fetal lung fibroblasts Cell Line	lung
30	chr1:95449200-95452600	Weak transcription	Placenta Amnion	Placenta Amnion
31	chr1:95449200-95452800	Weak transcription	Adipose Nuclei	Adipose
32	chr1:95449200-95453800	Weak transcription	Skeletal Muscle Male	skeletal muscle
33	chr1:95449200-95455000	Weak transcription	Foreskin Fibroblast Primary Cells skin02	Skin
34	chr1:95449200-95455000	Weak transcription	Fetal Muscle Leg	muscle
35	chr1:95449200-95455000	Weak transcription	Rectal Smooth Muscle	rectum
36	chr1:95449200-95455000	Weak transcription	Right Atrium	heart
37	chr1:95449200-95455400	Weak transcription	Fetal Heart	heart
38	chr1:95449400-95452400	Weak transcription	NHDF-Ad	bronchial
39	chr1:95449400-95452400	Weak transcription	NHEK	skin
40	chr1:95449400-95452400	Weak transcription	Osteobl	bone
41	chr1:95449400-95452600	Weak transcription	Mesenchymal Stem Cell Derived Adipocyte Cultured Cells	ES cell derived
42	chr1:95449400-95453600	Weak transcription	HUVEC	blood vessel
43	chr1:95449800-95452400	Weak transcription	H1 Derived Mesenchymal Stem Cells	ES cell derived
44	chr1:95450000-95452400	Weak transcription	Adipose Derived Mesenchymal Stem Cell Cultured Cells	ES cell derived
45	chr1:95450000-95452600	Weak transcription	Aorta	Aorta
46	chr1:95450400-95452200	Weak transcription	Muscle Satellite Cultured Cells	--
47	chr1:95450600-95460000	Weak transcription	Fetal Lung	lung
48	chr1:95450800-95452200	Enhancers	Cortex derived primary cultured neurospheres	brain
49	chr1:95451000-95452000	Enhancers	Ganglion Eminence derived primary cultured neurospheres	brain
50	chr1:95451000-95453200	Enhancers	Mesenchymal Stem Cell Derived Chondrocyte Cultured Cells	embryonic stem cell

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