The 2.0 version of rSNPBase

Variant report

Variant rs12751633
Chromosome Location chr1:95482668-95482669
allele C/T
Outlinks Ensembl   UCSC
Chromatin state (count:53 , 50 per page) page: 1 2
No. Chromosome Location Chromatin state Cell line Tissue
1 chr1:95447000-95490800 Weak transcription Fetal Intestine Large intestine
2 chr1:95448200-95491000 Weak transcription Primary B cells from cord blood blood
3 chr1:95469200-95487200 Weak transcription Small Intestine intestine
4 chr1:95476000-95490800 Weak transcription Primary T cells from cord blood blood
5 chr1:95478600-95484000 Weak transcription IMR90 fetal lung fibroblasts Cell Line lung
6 chr1:95478800-95485600 Enhancers HepG2 liver
7 chr1:95479400-95485000 Enhancers Cortex derived primary cultured neurospheres brain
8 chr1:95479800-95483600 Weak transcription Breast variant Human Mammary Epithelial Cells (vHMEC) Breast
9 chr1:95479800-95484400 Weak transcription Hela-S3 cervix
10 chr1:95480000-95483600 Weak transcription Bone Marrow Derived Cultured Mesenchymal Stem Cells Bone marrow
11 chr1:95480000-95484000 Weak transcription H9 Derived Neuronal Progenitor Cultured Cells ES cell derived
12 chr1:95480000-95484000 Weak transcription Foreskin Fibroblast Primary Cells skin01 Skin
13 chr1:95480000-95484000 Weak transcription Fetal Lung lung
14 chr1:95480000-95484000 Weak transcription HSMM muscle
15 chr1:95480000-95484000 Weak transcription Osteobl bone
16 chr1:95480000-95484200 Weak transcription Muscle Satellite Cultured Cells --
17 chr1:95480000-95484200 Weak transcription A549 lung
18 chr1:95480000-95487000 Weak transcription Brain Angular Gyrus brain
19 chr1:95480000-95508800 Weak transcription Skeletal Muscle Female skeletal muscle
20 chr1:95480200-95483000 Weak transcription Fetal Muscle Leg muscle
21 chr1:95480200-95483400 Weak transcription NHLF lung
22 chr1:95480200-95484000 Weak transcription hESC Derived CD56+ Mesoderm Cultured Cells ES cell derived
23 chr1:95480200-95484000 Weak transcription Mesenchymal Stem Cell Derived Chondrocyte Cultured Cells embryonic stem cell
24 chr1:95480200-95484000 Weak transcription Gastric stomach
25 chr1:95480200-95484400 Weak transcription Fetal Kidney kidney
26 chr1:95480200-95487000 Weak transcription HUVEC blood vessel
27 chr1:95480200-95487200 Weak transcription Foreskin Fibroblast Primary Cells skin02 Skin
28 chr1:95480200-95487200 Weak transcription Ovary ovary
29 chr1:95480200-95490600 Weak transcription Liver Liver
30 chr1:95480600-95487200 Weak transcription Pancreatic Islets Pancreatic Islet
31 chr1:95480600-95487800 Weak transcription Skeletal Muscle Male skeletal muscle
32 chr1:95480600-95488000 Weak transcription Foreskin Melanocyte Primary Cells skin01 Skin
33 chr1:95480600-95491400 Weak transcription Fetal Intestine Small intestine
34 chr1:95480800-95482800 Weak transcription Foreskin Melanocyte Primary Cells skin03 Skin
35 chr1:95480800-95483400 Weak transcription Stomach Mucosa stomach
36 chr1:95480800-95484000 Weak transcription Mesenchymal Stem Cell Derived Adipocyte Cultured Cells ES cell derived
37 chr1:95480800-95484200 Weak transcription Fetal Stomach stomach
38 chr1:95480800-95484400 Weak transcription Adipose Nuclei Adipose
39 chr1:95480800-95490800 Weak transcription Left Ventricle heart
40 chr1:95481000-95484400 Enhancers Breast Myoepithelial Primary Cells Breast
41 chr1:95481000-95487000 Weak transcription Fetal Brain Male brain
42 chr1:95481200-95484800 Enhancers Ganglion Eminence derived primary cultured neurospheres brain
43 chr1:95481400-95482800 Weak transcription HSMMtube muscle
44 chr1:95481400-95484600 Weak transcription Duodenum Smooth Muscle Duodenum
45 chr1:95481400-95486600 Weak transcription Brain Anterior Caudate brain
46 chr1:95481400-95486800 Weak transcription Brain Hippocampus Middle brain
47 chr1:95481600-95484000 Weak transcription HMEC breast
48 chr1:95481800-95486600 Weak transcription Colon Smooth Muscle Colon
49 chr1:95482400-95482800 Weak transcription hESC Derived CD184+ Endoderm Cultured Cells ES cell derived
50 chr1:95482400-95483200 Enhancers H1 Derived Neuronal Progenitor Cultured Cells ES cell derived

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Last update: Aug 31, 2015