Variant report

Variant	rs35328371
Chromosome Location	chr1:95479860-95479861
allele	A/G
Outlinks	Ensembl UCSC

Chromatin state
Related regulatory elements
Target genes
Other information

Extended variants
information (count: 21 )
Associated
traits (count: 0)

rSNPs within LD-proxies of this variant (count:21)

rs_ID	r²[population]
rs11165297	0.83[AFR][1000 genomes];0.97[AMR][1000 genomes];0.93[EUR][1000 genomes];0.91[ASN][1000 genomes]
rs11590106	0.91[AMR][1000 genomes];0.94[ASN][1000 genomes]
rs12717800	1.00[AFR][1000 genomes];1.00[AMR][1000 genomes];1.00[EUR][1000 genomes];1.00[ASN][1000 genomes]
rs12751633	1.00[AFR][1000 genomes];1.00[AMR][1000 genomes];1.00[EUR][1000 genomes];0.93[ASN][1000 genomes]
rs12755096	0.86[AMR][1000 genomes];0.89[ASN][1000 genomes]
rs12760863	0.92[AMR][1000 genomes];0.92[EUR][1000 genomes];0.89[ASN][1000 genomes]
rs34726676	0.81[AMR][1000 genomes]
rs4131811	0.86[AMR][1000 genomes];1.00[ASN][1000 genomes]
rs6669262	0.94[AFR][1000 genomes];0.97[AMR][1000 genomes];1.00[EUR][1000 genomes];1.00[ASN][1000 genomes]
rs6671842	0.83[AFR][1000 genomes];0.97[AMR][1000 genomes];0.93[EUR][1000 genomes]
rs6674604	0.88[AFR][1000 genomes];1.00[AMR][1000 genomes];0.97[EUR][1000 genomes];0.94[ASN][1000 genomes]
rs6695561	0.85[AFR][1000 genomes];0.98[AMR][1000 genomes];0.93[EUR][1000 genomes];0.92[ASN][1000 genomes]
rs6698894	0.83[AFR][1000 genomes];0.97[AMR][1000 genomes];0.93[EUR][1000 genomes];0.93[ASN][1000 genomes]
rs67440829	0.96[EUR][1000 genomes]
rs71652601	0.91[AMR][1000 genomes];0.98[ASN][1000 genomes]
rs71652602	0.95[AFR][1000 genomes];1.00[AMR][1000 genomes];0.98[EUR][1000 genomes];0.92[ASN][1000 genomes]
rs71654403	0.81[AMR][1000 genomes]
rs74101985	0.91[AMR][1000 genomes];1.00[ASN][1000 genomes]
rs7540821	1.00[AFR][1000 genomes];1.00[AMR][1000 genomes];1.00[EUR][1000 genomes];0.98[ASN][1000 genomes]
rs7543156	0.93[AFR][1000 genomes];0.98[AMR][1000 genomes];0.94[EUR][1000 genomes];0.92[ASN][1000 genomes]
rs9661047	0.99[AFR][1000 genomes];0.98[AMR][1000 genomes];0.98[EUR][1000 genomes];0.94[ASN][1000 genomes]

No data

Chromatin state (count:57 , 50 per page) page: 1 2

No.	Chromosome Location	Chromatin state	Cell line	Tissue
1	chr1:95447000-95490800	Weak transcription	Fetal Intestine Large	intestine
2	chr1:95448200-95491000	Weak transcription	Primary B cells from cord blood	blood
3	chr1:95468600-95482400	Weak transcription	H1 Derived Neuronal Progenitor Cultured Cells	ES cell derived
4	chr1:95469200-95487200	Weak transcription	Small Intestine	intestine
5	chr1:95473600-95481200	Weak transcription	Aorta	Aorta
6	chr1:95476000-95490800	Weak transcription	Primary T cells from cord blood	blood
7	chr1:95477600-95480000	Enhancers	HSMM	muscle
8	chr1:95477800-95480000	Enhancers	Muscle Satellite Cultured Cells	--
9	chr1:95477800-95480000	Enhancers	Osteobl	bone
10	chr1:95477800-95480200	Enhancers	NHDF-Ad	bronchial
11	chr1:95478000-95480000	Enhancers	Fetal Adrenal Gland	Adrenal Gland
12	chr1:95478000-95480200	Enhancers	Ovary	ovary
13	chr1:95478000-95480200	Enhancers	HUVEC	blood vessel
14	chr1:95478200-95480200	Enhancers	NHLF	lung
15	chr1:95478200-95480800	Enhancers	Adipose Nuclei	Adipose
16	chr1:95478600-95484000	Weak transcription	IMR90 fetal lung fibroblasts Cell Line	lung
17	chr1:95478800-95485600	Enhancers	HepG2	liver
18	chr1:95479200-95480000	Enhancers	Brain Angular Gyrus	brain
19	chr1:95479200-95480000	Enhancers	Fetal Lung	lung
20	chr1:95479200-95480000	Weak transcription	Left Ventricle	heart
21	chr1:95479200-95480200	Enhancers	Liver	Liver
22	chr1:95479200-95480200	Enhancers	Stomach Mucosa	stomach
23	chr1:95479200-95480600	Enhancers	Skeletal Muscle Male	skeletal muscle
24	chr1:95479200-95480800	Enhancers	Foreskin Melanocyte Primary Cells skin03	Skin
25	chr1:95479400-95480000	Enhancers	Bone Marrow Derived Cultured Mesenchymal Stem Cells	Bone marrow
26	chr1:95479400-95480200	Enhancers	hESC Derived CD56+ Mesoderm Cultured Cells	ES cell derived
27	chr1:95479400-95480600	Enhancers	Pancreatic Islets	Pancreatic Islet
28	chr1:95479400-95481400	Enhancers	Brain Hippocampus Middle	brain
29	chr1:95479400-95485000	Enhancers	Cortex derived primary cultured neurospheres	brain
30	chr1:95479600-95480000	Enhancers	H9 Derived Neuronal Progenitor Cultured Cells	ES cell derived
31	chr1:95479600-95480000	Flanking Active TSS	Adipose Derived Mesenchymal Stem Cell Cultured Cells	ES cell derived
32	chr1:95479600-95480000	Enhancers	Breast Myoepithelial Primary Cells	Breast
33	chr1:95479600-95480000	Enhancers	Foreskin Fibroblast Primary Cells skin01	Skin
34	chr1:95479600-95480000	Enhancers	Brain Inferior Temporal Lobe	brain
35	chr1:95479600-95480000	Enhancers	A549	lung
36	chr1:95479600-95480000	Enhancers	HSMMtube	muscle
37	chr1:95479600-95480200	Enhancers	hESC Derived CD184+ Endoderm Cultured Cells	ES cell derived
38	chr1:95479600-95480200	Enhancers	Mesenchymal Stem Cell Derived Chondrocyte Cultured Cells	embryonic stem cell
39	chr1:95479600-95480200	Enhancers	Ganglion Eminence derived primary cultured neurospheres	brain
40	chr1:95479600-95480200	Enhancers	Brain Dorsolateral Prefrontal Cortex	brain
41	chr1:95479600-95480200	Enhancers	Fetal Kidney	kidney
42	chr1:95479600-95480200	Enhancers	Fetal Muscle Leg	muscle
43	chr1:95479600-95480200	Enhancers	Fetal Stomach	stomach
44	chr1:95479600-95480400	Weak transcription	Colon Smooth Muscle	Colon
45	chr1:95479600-95480600	Enhancers	Fetal Intestine Small	intestine
46	chr1:95479600-95480600	Weak transcription	HMEC	breast
47	chr1:95479600-95481000	Enhancers	Brain Substantia Nigra	brain
48	chr1:95479600-95481400	Enhancers	Brain Cingulate Gyrus	brain
49	chr1:95479800-95480000	Enhancers	Skeletal Muscle Female	skeletal muscle
50	chr1:95479800-95480200	Flanking Active TSS	Mesenchymal Stem Cell Derived Adipocyte Cultured Cells	ES cell derived

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