The 2.0 version of rSNPBase

Variant report

Variant rs6669262
Chromosome Location chr1:95469163-95469164
allele A/C
Outlinks Ensembl   UCSC
Chromatin state (count:49 , 50 per page) page: 1
No. Chromosome Location Chromatin state Cell line Tissue
1 chr1:95447000-95490800 Weak transcription Fetal Intestine Large intestine
2 chr1:95448200-95491000 Weak transcription Primary B cells from cord blood blood
3 chr1:95455200-95473600 Weak transcription Gastric stomach
4 chr1:95459600-95473000 Weak transcription Aorta Aorta
5 chr1:95459600-95473000 Weak transcription Pancreas Pancrea
6 chr1:95460400-95478400 Weak transcription Left Ventricle heart
7 chr1:95461200-95469600 Enhancers Cortex derived primary cultured neurospheres brain
8 chr1:95464000-95473000 Weak transcription Lung lung
9 chr1:95467000-95469400 Enhancers Foreskin Melanocyte Primary Cells skin03 Skin
10 chr1:95467600-95469200 Enhancers Ovary ovary
11 chr1:95467600-95469200 Enhancers Right Ventricle heart
12 chr1:95467600-95469200 Enhancers Stomach Smooth Muscle stomach
13 chr1:95467600-95469400 Enhancers IMR90 fetal lung fibroblasts Cell Line lung
14 chr1:95467600-95469400 Enhancers Fetal Adrenal Gland Adrenal Gland
15 chr1:95467600-95469400 Enhancers NHLF lung
16 chr1:95467800-95469200 Enhancers Sigmoid Colon Sigmoid Colon
17 chr1:95467800-95469200 Enhancers Small Intestine intestine
18 chr1:95467800-95469400 Enhancers Foreskin Fibroblast Primary Cells skin02 Skin
19 chr1:95467800-95469400 Enhancers HepG2 liver
20 chr1:95468000-95469200 Enhancers NH-A brain
21 chr1:95468000-95469200 Enhancers Osteobl bone
22 chr1:95468000-95469400 Enhancers Bone Marrow Derived Cultured Mesenchymal Stem Cells Bone marrow
23 chr1:95468000-95472200 Weak transcription Placenta Placenta
24 chr1:95468000-95472800 Weak transcription Placenta Amnion Placenta Amnion
25 chr1:95468200-95469200 Enhancers Rectal Mucosa Donor 31 rectum
26 chr1:95468200-95469400 Enhancers HUVEC blood vessel
27 chr1:95468200-95469800 Enhancers NHEK skin
28 chr1:95468400-95469200 Enhancers Fetal Intestine Small intestine
29 chr1:95468400-95469200 Enhancers K562 blood
30 chr1:95468600-95469200 Enhancers H9 Derived Neuron Cultured Cells ES cell derived
31 chr1:95468600-95469200 Enhancers Fetal Lung lung
32 chr1:95468600-95482400 Weak transcription H1 Derived Neuronal Progenitor Cultured Cells ES cell derived
33 chr1:95468800-95469200 Enhancers Mesenchymal Stem Cell Derived Adipocyte Cultured Cells ES cell derived
34 chr1:95468800-95469600 Enhancers Adipose Derived Mesenchymal Stem Cell Cultured Cells ES cell derived
35 chr1:95468800-95469600 Enhancers Foreskin Fibroblast Primary Cells skin01 Skin
36 chr1:95468800-95472000 Weak transcription HSMMtube muscle
37 chr1:95468800-95472800 Weak transcription HMEC breast
38 chr1:95468800-95473000 Weak transcription Breast Myoepithelial Primary Cells Breast
39 chr1:95468800-95473200 Weak transcription Foreskin Keratinocyte Primary Cells skin03 Skin
40 chr1:95468800-95479600 Weak transcription Mesenchymal Stem Cell Derived Chondrocyte Cultured Cells embryonic stem cell
41 chr1:95469000-95469200 Enhancers H1 BMP4 Derived Trophoblast Cultured Cells ES cell derived
42 chr1:95469000-95469200 Enhancers Fetal Muscle Trunk muscle
43 chr1:95469000-95469200 Enhancers Fetal Muscle Leg muscle
44 chr1:95469000-95469600 Enhancers Muscle Satellite Cultured Cells --
45 chr1:95469000-95472000 Weak transcription Fetal Kidney kidney
46 chr1:95469000-95472000 Weak transcription Fetal Stomach stomach
47 chr1:95469000-95472200 Weak transcription HSMM muscle
48 chr1:95469000-95472800 Weak transcription Breast variant Human Mammary Epithelial Cells (vHMEC) Breast
49 chr1:95469000-95479600 Weak transcription hESC Derived CD184+ Endoderm Cultured Cells ES cell derived

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Last update: Aug 31, 2015