Variant report

Variant	rs2435294
Chromosome Location	chr11:105828379-105828380
allele	C/T
Outlinks	Ensembl UCSC

Chromatin state
Related regulatory elements
Target genes
Other information

Extended variants
information (count: 34 )
Associated
traits (count: 1 )

rSNPs within LD-proxies of this variant (count:34)

rs_ID	r²[population]
rs1147065	0.82[AMR][1000 genomes]
rs1262357	0.82[AMR][1000 genomes]
rs1267444	0.82[AMR][1000 genomes]
rs1271110	0.80[AMR][1000 genomes]
rs17104770	0.86[EUR][1000 genomes]
rs2155338	0.80[AMR][1000 genomes]
rs3758790	0.81[AMR][1000 genomes]
rs471396	0.82[AMR][1000 genomes]
rs471795	0.82[AMR][1000 genomes]
rs505829	0.82[AMR][1000 genomes]
rs507450	0.82[AMR][1000 genomes]
rs511106	0.82[AMR][1000 genomes]
rs513947	0.82[AMR][1000 genomes]
rs534844	0.85[AMR][1000 genomes]
rs556968	0.85[AMR][1000 genomes]
rs561643	0.85[AMR][1000 genomes]
rs562546	0.81[AMR][1000 genomes]
rs589574	0.81[AMR][1000 genomes]
rs592656	0.81[AMR][1000 genomes]
rs593130	0.82[AMR][1000 genomes]
rs604545	0.82[AMR][1000 genomes]
rs609235	0.80[AMR][1000 genomes]
rs619323	0.85[AMR][1000 genomes]
rs63749277	0.82[AMR][1000 genomes];0.80[ASN][1000 genomes]
rs640988	0.82[AMR][1000 genomes]
rs654035	0.82[AMR][1000 genomes]
rs656292	0.82[AMR][1000 genomes]
rs659840	0.82[AMR][1000 genomes]
rs660278	0.82[AMR][1000 genomes]
rs665554	0.85[AMR][1000 genomes]
rs675084	0.81[EUR][1000 genomes]
rs677315	0.85[AMR][1000 genomes]
rs684470	0.82[AMR][1000 genomes]
rs7116046	0.84[AMR][1000 genomes];0.90[EUR][1000 genomes]

mRNA abundance (count:1)

SNP	Gene	Cis/trans	Tissue	Source
rs2435294	KIAA1826	cis	brain	BrainEAC

Chromatin state (count:1 , 50 per page) page: 1

No.	Chromosome Location	Chromatin state	Cell line	Tissue
1	chr11:105827400-105850200	Weak transcription	Ganglion Eminence derived primary cultured neurospheres	brain

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Input of quick search could be:

dbSNP/dbVar ID: rs12345 /nsv7879
a single nucleotide as 0-based coordinates: chr1:12345
chromosomal regions: chr1:12345-34567

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