Variant report

Variant	rs675084
Chromosome Location	chr11:105817907-105817908
allele	A/G
Outlinks	Ensembl UCSC

Chromatin state
Related regulatory elements
Target genes
Other information

Extended variants
information (count: 53 )
Associated
traits (count: 0)

rSNPs within LD-proxies of this variant (count:53)

rs_ID	r²[population]
rs1147065	0.81[AFR][1000 genomes];0.86[AMR][1000 genomes];0.94[ASN][1000 genomes]
rs1262357	0.84[AFR][1000 genomes];0.86[AMR][1000 genomes];0.80[EUR][1000 genomes];0.93[ASN][1000 genomes]
rs1267444	0.84[AFR][1000 genomes];0.86[AMR][1000 genomes];0.94[ASN][1000 genomes]
rs17104770	0.91[AFR][1000 genomes];0.97[AMR][1000 genomes];0.95[EUR][1000 genomes];1.00[ASN][1000 genomes]
rs1939800	0.90[AFR][1000 genomes];0.93[EUR][1000 genomes];0.97[ASN][1000 genomes]
rs2155338	0.82[AMR][1000 genomes];0.94[ASN][1000 genomes]
rs2186589	0.84[AFR][1000 genomes]
rs2435294	0.81[EUR][1000 genomes]
rs3758790	0.85[AMR][1000 genomes];0.94[ASN][1000 genomes]
rs471396	0.84[AFR][1000 genomes];0.86[AMR][1000 genomes];0.94[ASN][1000 genomes]
rs471795	0.86[AMR][1000 genomes];0.94[ASN][1000 genomes]
rs505829	0.81[AFR][1000 genomes];0.86[AMR][1000 genomes];0.94[ASN][1000 genomes]
rs507450	0.84[AFR][1000 genomes];0.86[AMR][1000 genomes];0.94[ASN][1000 genomes]
rs509512	0.84[ASN][1000 genomes]
rs511106	0.84[AFR][1000 genomes];0.86[AMR][1000 genomes];0.94[ASN][1000 genomes]
rs513947	0.83[AFR][1000 genomes];0.86[AMR][1000 genomes];0.93[ASN][1000 genomes]
rs534844	0.84[AFR][1000 genomes];0.89[AMR][1000 genomes];0.80[EUR][1000 genomes];0.94[ASN][1000 genomes]
rs539238	0.87[ASN][1000 genomes]
rs548814	0.84[AMR][1000 genomes];0.90[ASN][1000 genomes]
rs556968	0.84[AFR][1000 genomes];0.89[AMR][1000 genomes];0.81[EUR][1000 genomes];0.94[ASN][1000 genomes]
rs561643	0.84[AFR][1000 genomes];0.89[AMR][1000 genomes];0.81[EUR][1000 genomes];0.94[ASN][1000 genomes]
rs562546	0.85[AMR][1000 genomes];0.94[ASN][1000 genomes]
rs567161	0.84[ASN][1000 genomes]
rs571533	0.84[ASN][1000 genomes]
rs582479	0.94[AFR][1000 genomes];0.93[EUR][1000 genomes];0.94[ASN][1000 genomes]
rs588638	0.84[ASN][1000 genomes]
rs589574	0.81[AFR][1000 genomes];0.85[AMR][1000 genomes];0.94[ASN][1000 genomes]
rs592656	0.81[AFR][1000 genomes];0.85[AMR][1000 genomes];0.94[ASN][1000 genomes]
rs593130	0.81[AFR][1000 genomes];0.86[AMR][1000 genomes];0.94[ASN][1000 genomes]
rs601480	0.84[ASN][1000 genomes]
rs604545	0.81[AFR][1000 genomes];0.84[AMR][1000 genomes];0.94[ASN][1000 genomes]
rs609235	0.84[AMR][1000 genomes];0.93[ASN][1000 genomes]
rs619323	0.84[AFR][1000 genomes];0.89[AMR][1000 genomes];0.81[EUR][1000 genomes];0.94[ASN][1000 genomes]
rs622367	0.83[ASN][1000 genomes]
rs63749277	0.82[AMR][1000 genomes];0.80[EUR][1000 genomes];0.84[ASN][1000 genomes]
rs638777	0.84[ASN][1000 genomes]
rs639003	0.84[ASN][1000 genomes]
rs640988	0.81[AFR][1000 genomes];0.86[AMR][1000 genomes];0.95[ASN][1000 genomes]
rs641574	0.94[AFR][1000 genomes];0.93[EUR][1000 genomes];0.97[ASN][1000 genomes]
rs645905	0.84[ASN][1000 genomes]
rs654035	0.81[AFR][1000 genomes];0.86[AMR][1000 genomes];0.94[ASN][1000 genomes]
rs656292	0.81[AFR][1000 genomes];0.86[AMR][1000 genomes];0.94[ASN][1000 genomes]
rs6591144	0.82[ASN][1000 genomes]
rs659840	0.81[AFR][1000 genomes];0.86[AMR][1000 genomes];0.94[ASN][1000 genomes]
rs660278	0.81[AFR][1000 genomes];0.86[AMR][1000 genomes];0.94[ASN][1000 genomes]
rs665554	0.84[AFR][1000 genomes];0.89[AMR][1000 genomes];0.81[EUR][1000 genomes];0.94[ASN][1000 genomes]
rs669397	0.83[ASN][1000 genomes]
rs669793	0.84[ASN][1000 genomes]
rs675001	0.84[ASN][1000 genomes]
rs677315	0.82[AFR][1000 genomes];0.89[AMR][1000 genomes];0.81[EUR][1000 genomes];0.94[ASN][1000 genomes]
rs684470	0.81[AFR][1000 genomes];0.86[AMR][1000 genomes];0.94[ASN][1000 genomes]
rs694514	0.87[ASN][1000 genomes]
rs7116046	0.86[AFR][1000 genomes];0.90[AMR][1000 genomes];0.90[EUR][1000 genomes];0.98[ASN][1000 genomes]

No data

Chromatin state (count:9 , 50 per page) page: 1

No.	Chromosome Location	Chromatin state	Cell line	Tissue
1	chr11:105807600-105819400	Weak transcription	IMR90 fetal lung fibroblasts Cell Line	lung
2	chr11:105814000-105818600	Weak transcription	Brain Cingulate Gyrus	brain
3	chr11:105814000-105818600	Weak transcription	Brain Substantia Nigra	brain
4	chr11:105814200-105818000	Weak transcription	Cortex derived primary cultured neurospheres	brain
5	chr11:105814200-105818000	Weak transcription	Foreskin Melanocyte Primary Cells skin03	Skin
6	chr11:105814200-105818800	Weak transcription	Ganglion Eminence derived primary cultured neurospheres	brain
7	chr11:105815400-105819000	Enhancers	Brain Hippocampus Middle	brain
8	chr11:105817800-105818400	Enhancers	Brain Angular Gyrus	brain
9	chr11:105817800-105818800	Enhancers	Brain Inferior Temporal Lobe	brain

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