The 2.0 version of rSNPBase

Variant report

Variant rs2476604
Chromosome Location chr1:114406444-114406445
allele A/T
Outlinks Ensembl   UCSC
Chromatin state (count:39 , 50 per page) page: 1
No. Chromosome Location Chromatin state Cell line Tissue
1 chr1:114355800-114413000 Weak transcription Rectal Mucosa Donor 31 rectum
2 chr1:114397800-114409800 Weak transcription Primary T cells effector/memory enriched fromperipheralblood blood
3 chr1:114401600-114409000 Weak transcription Primary T helper naive cells fromperipheralblood blood
4 chr1:114401600-114412000 Weak transcription Sigmoid Colon Sigmoid Colon
5 chr1:114401800-114410800 Weak transcription Fetal Thymus thymus
6 chr1:114402800-114411200 Weak transcription Primary mononuclear cells fromperipheralblood Blood
7 chr1:114403400-114412600 Weak transcription Duodenum Mucosa Duodenum
8 chr1:114403600-114406800 Weak transcription Primary T helper 17 cells PMA-I stimulated --
9 chr1:114403600-114408200 Weak transcription Primary T helper naive cells from peripheral blood blood
10 chr1:114403800-114408200 Weak transcription Primary T helper memory cells from peripheral blood 1 blood
11 chr1:114403800-114409400 Weak transcription Breast variant Human Mammary Epithelial Cells (vHMEC) Breast
12 chr1:114403800-114410400 Weak transcription Rectal Mucosa Donor 29 rectum
13 chr1:114403800-114411200 Weak transcription Primary hematopoietic stem cells blood
14 chr1:114404400-114409400 Weak transcription Primary T cells fromperipheralblood blood
15 chr1:114404600-114408200 Strong transcription Primary T cells from cord blood blood
16 chr1:114404600-114409200 Weak transcription Foreskin Keratinocyte Primary Cells skin03 Skin
17 chr1:114404600-114409400 Weak transcription Primary T killer memory cells from peripheral blood blood
18 chr1:114404600-114409400 Weak transcription HMEC breast
19 chr1:114404600-114409400 Weak transcription NHEK skin
20 chr1:114404600-114409800 Weak transcription Adipose Derived Mesenchymal Stem Cell Cultured Cells ES cell derived
21 chr1:114404600-114410800 Weak transcription Primary hematopoietic stem cells G-CSF-mobilized Male --
22 chr1:114404800-114410800 Weak transcription Primary hematopoietic stem cells G-CSF-mobilized Female --
23 chr1:114405200-114410400 Weak transcription Osteobl bone
24 chr1:114405400-114406600 Strong transcription Primary Natural Killer cells fromperipheralblood blood
25 chr1:114405400-114408600 Weak transcription Primary T helper memory cells from peripheral blood 2 blood
26 chr1:114405400-114409400 Weak transcription Primary T helper cells fromperipheralblood blood
27 chr1:114405600-114407600 Weak transcription Primary T helper cells PMA-I stimulated --
28 chr1:114405600-114407800 Weak transcription Primary T killer naive cells fromperipheralblood blood
29 chr1:114405800-114408000 Strong transcription Monocytes-CD14+_RO01746 blood
30 chr1:114405800-114410200 Weak transcription Primary monocytes fromperipheralblood blood
31 chr1:114405800-114410200 Weak transcription Primary B cells from cord blood blood
32 chr1:114405800-114413800 Weak transcription K562 blood
33 chr1:114406000-114407600 Strong transcription Thymus Thymus
34 chr1:114406000-114412400 Weak transcription Primary hematopoietic stem cells short term culture blood
35 chr1:114406200-114407000 Enhancers GM12878-XiMat blood
36 chr1:114406200-114408800 Strong transcription Primary B cells from peripheral blood blood
37 chr1:114406400-114407600 Weak transcription Primary T regulatory cells fromperipheralblood blood
38 chr1:114406400-114409000 Weak transcription Primary neutrophils fromperipheralblood blood
39 chr1:114406400-114410200 Weak transcription Dnd41 blood

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Last update: Aug 31, 2015