The 2.0 version of rSNPBase

Variant report

Variant rs7556622
Chromosome Location chr1:114256379-114256380
allele C/G
Outlinks Ensembl   UCSC
Chromatin state (count:113 , 50 per page) page: 1 2 3
No. Chromosome Location Chromatin state Cell line Tissue
1 chr1:114203200-114298600 Weak transcription Fetal Brain Male brain
2 chr1:114216200-114279800 Weak transcription Stomach Smooth Muscle stomach
3 chr1:114220400-114263800 Weak transcription Fetal Kidney kidney
4 chr1:114227000-114268200 Weak transcription NHLF lung
5 chr1:114228000-114287800 Weak transcription Rectal Mucosa Donor 31 rectum
6 chr1:114236400-114300000 Weak transcription Small Intestine intestine
7 chr1:114237400-114256600 Weak transcription Colonic Mucosa Colon
8 chr1:114238000-114258200 Weak transcription Fetal Heart heart
9 chr1:114238200-114264400 Weak transcription Primary T helper memory cells from peripheral blood 1 blood
10 chr1:114238400-114266800 Weak transcription NHEK skin
11 chr1:114239000-114260400 Weak transcription H1 BMP4 Derived Mesendoderm Cultured Cells ES cell derived
12 chr1:114239200-114279800 Weak transcription Colon Smooth Muscle Colon
13 chr1:114239400-114258600 Strong transcription H9 Derived Neuronal Progenitor Cultured Cells ES cell derived
14 chr1:114240200-114260800 Weak transcription iPS DF 6.9 Cell Line embryonic stem cell
15 chr1:114240200-114279400 Weak transcription Psoas Muscle Psoas
16 chr1:114242000-114300000 Weak transcription Rectal Smooth Muscle rectum
17 chr1:114242200-114256400 Weak transcription H1 Derived Mesenchymal Stem Cells ES cell derived
18 chr1:114242200-114256400 Weak transcription ES-UCSF4 Cell Line embryonic stem cell
19 chr1:114242200-114256400 Weak transcription Foreskin Fibroblast Primary Cells skin02 Skin
20 chr1:114242200-114256400 Weak transcription Aorta Aorta
21 chr1:114242200-114256400 Weak transcription Spleen Spleen
22 chr1:114242200-114256600 Weak transcription Foreskin Melanocyte Primary Cells skin01 Skin
23 chr1:114242200-114258800 Weak transcription Brain Substantia Nigra brain
24 chr1:114242200-114260200 Weak transcription Esophagus oesophagus
25 chr1:114242200-114260800 Weak transcription H1 Derived Neuronal Progenitor Cultured Cells ES cell derived
26 chr1:114242200-114260800 Weak transcription Fetal Lung lung
27 chr1:114242200-114260800 Weak transcription Ovary ovary
28 chr1:114242200-114261000 Weak transcription H9 Cell Line embryonic stem cell
29 chr1:114242200-114261200 Weak transcription Brain Hippocampus Middle brain
30 chr1:114242200-114261200 Weak transcription Skeletal Muscle Male skeletal muscle
31 chr1:114242800-114269800 Weak transcription Primary T killer naive cells fromperipheralblood blood
32 chr1:114245400-114258000 Strong transcription Mesenchymal Stem Cell Derived Adipocyte Cultured Cells ES cell derived
33 chr1:114245400-114270800 Weak transcription Primary T helper cells fromperipheralblood blood
34 chr1:114245400-114275000 Weak transcription Primary T helper 17 cells PMA-I stimulated --
35 chr1:114245600-114300600 Weak transcription Primary T cells effector/memory enriched fromperipheralblood blood
36 chr1:114245800-114261200 Weak transcription Primary T cells from cord blood blood
37 chr1:114246000-114257400 Strong transcription Primary hematopoietic stem cells G-CSF-mobilized Female --
38 chr1:114246000-114259800 Strong transcription Primary hematopoietic stem cells G-CSF-mobilized Male --
39 chr1:114246000-114260200 Strong transcription Primary hematopoietic stem cells short term culture blood
40 chr1:114246200-114257200 Strong transcription HUVEC blood vessel
41 chr1:114246200-114257600 Strong transcription Mesenchymal Stem Cell Derived Chondrocyte Cultured Cells embryonic stem cell
42 chr1:114246400-114257600 Strong transcription Primary Natural Killer cells fromperipheralblood blood
43 chr1:114246400-114258800 Strong transcription Adipose Derived Mesenchymal Stem Cell Cultured Cells ES cell derived
44 chr1:114246600-114257600 Strong transcription H9 Derived Neuron Cultured Cells ES cell derived
45 chr1:114246800-114257400 Strong transcription Bone Marrow Derived Cultured Mesenchymal Stem Cells Bone marrow
46 chr1:114246800-114259400 Strong transcription hESC Derived CD56+ Mesoderm Cultured Cells ES cell derived
47 chr1:114247800-114257200 Strong transcription Primary neutrophils fromperipheralblood blood
48 chr1:114248200-114256400 Strong transcription HUES64 Cell Line embryonic stem cell
49 chr1:114248800-114290200 Weak transcription HMEC breast
50 chr1:114250600-114261200 Weak transcription Brain Cingulate Gyrus brain

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Last update: Aug 31, 2015