The 2.0 version of rSNPBase

Variant report

Variant rs1777238
Chromosome Location chr1:114191173-114191174
allele C/T
Outlinks Ensembl   UCSC
Chromatin state (count:77 , 50 per page) page: 1 2
No. Chromosome Location Chromatin state Cell line Tissue
1 chr1:114159000-114195000 Weak transcription Foreskin Keratinocyte Primary Cells skin02 Skin
2 chr1:114159200-114194800 Weak transcription Foreskin Keratinocyte Primary Cells skin03 Skin
3 chr1:114161800-114199800 Weak transcription Skeletal Muscle Female skeletal muscle
4 chr1:114171600-114241400 Weak transcription Right Ventricle heart
5 chr1:114172400-114192600 Weak transcription Pancreatic Islets Pancreatic Islet
6 chr1:114173000-114214400 Weak transcription Esophagus oesophagus
7 chr1:114173000-114226800 Weak transcription Aorta Aorta
8 chr1:114173600-114195000 Weak transcription HMEC breast
9 chr1:114173600-114206000 Weak transcription Foreskin Fibroblast Primary Cells skin01 Skin
10 chr1:114173800-114196200 Weak transcription Gastric stomach
11 chr1:114173800-114199600 Weak transcription Skeletal Muscle Male skeletal muscle
12 chr1:114173800-114201800 Weak transcription Colonic Mucosa Colon
13 chr1:114173800-114201800 Weak transcription Lung lung
14 chr1:114173800-114214400 Weak transcription Pancreas Pancrea
15 chr1:114173800-114236000 Weak transcription H1 Derived Mesenchymal Stem Cells ES cell derived
16 chr1:114179800-114239600 Weak transcription Spleen Spleen
17 chr1:114181200-114199400 Weak transcription Rectal Smooth Muscle rectum
18 chr1:114181800-114199800 Weak transcription Fetal Brain Female brain
19 chr1:114182000-114219600 Weak transcription Fetal Kidney kidney
20 chr1:114182200-114197600 Weak transcription Brain Hippocampus Middle brain
21 chr1:114182600-114194800 Weak transcription HSMM muscle
22 chr1:114182600-114206200 Weak transcription Hela-S3 cervix
23 chr1:114182800-114193600 Weak transcription Fetal Intestine Small intestine
24 chr1:114182800-114201800 Weak transcription Brain Germinal Matrix brain
25 chr1:114182800-114201800 Weak transcription Fetal Brain Male brain
26 chr1:114182800-114217400 Weak transcription NHDF-Ad bronchial
27 chr1:114183000-114196200 Weak transcription H9 Derived Neuronal Progenitor Cultured Cells ES cell derived
28 chr1:114183000-114200000 Weak transcription HSMMtube muscle
29 chr1:114183000-114201200 Weak transcription Brain Dorsolateral Prefrontal Cortex brain
30 chr1:114183000-114235800 Weak transcription Dnd41 blood
31 chr1:114183200-114199600 Weak transcription Brain Cingulate Gyrus brain
32 chr1:114183400-114193600 Weak transcription hESC Derived CD56+ Mesoderm Cultured Cells ES cell derived
33 chr1:114183400-114195400 Weak transcription Primary T helper cells PMA-I stimulated --
34 chr1:114183400-114199800 Weak transcription Brain Inferior Temporal Lobe brain
35 chr1:114183400-114215800 Weak transcription Fetal Lung lung
36 chr1:114183600-114199200 Weak transcription HUES64 Cell Line embryonic stem cell
37 chr1:114183600-114216400 Weak transcription A549 lung
38 chr1:114184400-114199600 Strong transcription hESC Derived CD184+ Endoderm Cultured Cells ES cell derived
39 chr1:114184600-114204800 Weak transcription Psoas Muscle Psoas
40 chr1:114184800-114199800 Weak transcription Brain Anterior Caudate brain
41 chr1:114184800-114201800 Weak transcription H1 BMP4 Derived Trophoblast Cultured Cells ES cell derived
42 chr1:114185000-114199600 Weak transcription Brain Substantia Nigra brain
43 chr1:114185200-114193600 Weak transcription Ovary ovary
44 chr1:114185200-114195000 Weak transcription Breast variant Human Mammary Epithelial Cells (vHMEC) Breast
45 chr1:114185200-114199400 Weak transcription Stomach Smooth Muscle stomach
46 chr1:114185200-114224400 Weak transcription Breast Myoepithelial Primary Cells Breast
47 chr1:114185400-114191600 Weak transcription Colon Smooth Muscle Colon
48 chr1:114185400-114200400 Weak transcription Duodenum Smooth Muscle Duodenum
49 chr1:114185400-114201200 Weak transcription Brain Angular Gyrus brain
50 chr1:114185400-114214600 Weak transcription Adipose Derived Mesenchymal Stem Cell Cultured Cells ES cell derived

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Last update: Aug 31, 2015