The 2.0 version of rSNPBase

Variant report

Variant rs1235688
Chromosome Location chr1:114141492-114141493
allele A/G
Outlinks Ensembl   UCSC
Chromatin state (count:47 , 50 per page) page: 1
No. Chromosome Location Chromatin state Cell line Tissue
1 chr1:114100600-114173400 Weak transcription Gastric stomach
2 chr1:114119200-114145200 Weak transcription Lung lung
3 chr1:114119200-114172400 Weak transcription Pancreas Pancrea
4 chr1:114119200-114173000 Weak transcription Sigmoid Colon Sigmoid Colon
5 chr1:114122800-114142600 Weak transcription Placenta Amnion Placenta Amnion
6 chr1:114124400-114172400 Weak transcription Aorta Aorta
7 chr1:114126600-114157200 Weak transcription HUVEC blood vessel
8 chr1:114132600-114143200 Weak transcription NH-A brain
9 chr1:114134600-114166400 Weak transcription Hela-S3 cervix
10 chr1:114135400-114141600 Weak transcription Skeletal Muscle Male skeletal muscle
11 chr1:114135800-114141800 Weak transcription Primary T helper 17 cells PMA-I stimulated --
12 chr1:114136800-114142000 Weak transcription Brain Angular Gyrus brain
13 chr1:114136800-114158800 Weak transcription Stomach Smooth Muscle stomach
14 chr1:114137000-114141800 ZNF genes & repeats hESC Derived CD184+ Endoderm Cultured Cells ES cell derived
15 chr1:114137000-114142000 Weak transcription HSMMtube muscle
16 chr1:114137000-114142400 Weak transcription Fetal Thymus thymus
17 chr1:114137000-114144000 Weak transcription Colon Smooth Muscle Colon
18 chr1:114137000-114145200 Weak transcription HUES48 Cell Line embryonic stem cell
19 chr1:114138000-114142600 Weak transcription ES-UCSF4 Cell Line embryonic stem cell
20 chr1:114138800-114141600 ZNF genes & repeats hESC Derived CD56+ Mesoderm Cultured Cells ES cell derived
21 chr1:114139400-114142000 Weak transcription Foreskin Fibroblast Primary Cells skin02 Skin
22 chr1:114139600-114141600 ZNF genes & repeats Liver Liver
23 chr1:114139800-114157400 Weak transcription Breast variant Human Mammary Epithelial Cells (vHMEC) Breast
24 chr1:114139800-114160000 Weak transcription Rectal Smooth Muscle rectum
25 chr1:114140000-114141800 Weak transcription HSMM muscle
26 chr1:114140000-114157400 Weak transcription Foreskin Keratinocyte Primary Cells skin03 Skin
27 chr1:114140400-114142000 Weak transcription Placenta Placenta
28 chr1:114140400-114157800 Weak transcription Muscle Satellite Cultured Cells --
29 chr1:114140600-114141800 Weak transcription hESC Derived CD56+ Ectoderm Cultured Cells ES cell derived
30 chr1:114140600-114145400 Weak transcription A549 lung
31 chr1:114140600-114150600 Weak transcription H9 Derived Neuron Cultured Cells ES cell derived
32 chr1:114140600-114151000 Weak transcription Ovary ovary
33 chr1:114140600-114157000 Weak transcription Duodenum Smooth Muscle Duodenum
34 chr1:114140600-114162200 Weak transcription NHDF-Ad bronchial
35 chr1:114140600-114172800 Weak transcription Colonic Mucosa Colon
36 chr1:114140800-114141600 Weak transcription H1 BMP4 Derived Trophoblast Cultured Cells ES cell derived
37 chr1:114140800-114142000 Weak transcription Left Ventricle heart
38 chr1:114140800-114145200 Weak transcription Fetal Stomach stomach
39 chr1:114140800-114162600 Weak transcription Rectal Mucosa Donor 29 rectum
40 chr1:114141000-114145200 Weak transcription Fetal Intestine Small intestine
41 chr1:114141000-114157800 Weak transcription Bone Marrow Derived Cultured Mesenchymal Stem Cells Bone marrow
42 chr1:114141000-114162600 Weak transcription Fetal Intestine Large intestine
43 chr1:114141200-114145000 Weak transcription Fetal Brain Female brain
44 chr1:114141200-114156800 Weak transcription Fetal Heart heart
45 chr1:114141200-114162200 Weak transcription Rectal Mucosa Donor 31 rectum
46 chr1:114141400-114157000 Weak transcription H9 Derived Neuronal Progenitor Cultured Cells ES cell derived
47 chr1:114141400-114162400 Weak transcription Mesenchymal Stem Cell Derived Adipocyte Cultured Cells ES cell derived

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Last update: Aug 31, 2015