The 2.0 version of rSNPBase

Variant report

Variant rs11102661
Chromosome Location chr1:114160758-114160759
allele A/G
Outlinks Ensembl   UCSC
Chromatin state (count:46 , 50 per page) page: 1
No. Chromosome Location Chromatin state Cell line Tissue
1 chr1:114100600-114173400 Weak transcription Gastric stomach
2 chr1:114119200-114172400 Weak transcription Pancreas Pancrea
3 chr1:114119200-114173000 Weak transcription Sigmoid Colon Sigmoid Colon
4 chr1:114124400-114172400 Weak transcription Aorta Aorta
5 chr1:114134600-114166400 Weak transcription Hela-S3 cervix
6 chr1:114140600-114162200 Weak transcription NHDF-Ad bronchial
7 chr1:114140600-114172800 Weak transcription Colonic Mucosa Colon
8 chr1:114140800-114162600 Weak transcription Rectal Mucosa Donor 29 rectum
9 chr1:114141000-114162600 Weak transcription Fetal Intestine Large intestine
10 chr1:114141200-114162200 Weak transcription Rectal Mucosa Donor 31 rectum
11 chr1:114141400-114162400 Weak transcription Mesenchymal Stem Cell Derived Adipocyte Cultured Cells ES cell derived
12 chr1:114145600-114160800 Weak transcription Fetal Intestine Small intestine
13 chr1:114146200-114163200 Weak transcription Fetal Lung lung
14 chr1:114147200-114163400 Weak transcription Duodenum Mucosa Duodenum
15 chr1:114151400-114172600 Weak transcription Ovary ovary
16 chr1:114151800-114166400 Weak transcription Breast Myoepithelial Primary Cells Breast
17 chr1:114153000-114163600 Weak transcription Fetal Kidney kidney
18 chr1:114153600-114168400 Weak transcription Fetal Muscle Trunk muscle
19 chr1:114154000-114172400 Weak transcription Fetal Stomach stomach
20 chr1:114155400-114162000 Weak transcription Liver Liver
21 chr1:114156200-114170000 Weak transcription Small Intestine intestine
22 chr1:114157400-114166400 Weak transcription Duodenum Smooth Muscle Duodenum
23 chr1:114157600-114163800 Weak transcription H9 Derived Neuronal Progenitor Cultured Cells ES cell derived
24 chr1:114157800-114161800 Enhancers Cortex derived primary cultured neurospheres brain
25 chr1:114158000-114161000 Enhancers Fetal Brain Male brain
26 chr1:114158600-114166400 Strong transcription hESC Derived CD184+ Endoderm Cultured Cells ES cell derived
27 chr1:114158800-114161600 Weak transcription Adipose Derived Mesenchymal Stem Cell Cultured Cells ES cell derived
28 chr1:114158800-114163200 Weak transcription HUES64 Cell Line embryonic stem cell
29 chr1:114158800-114168600 Weak transcription HUVEC blood vessel
30 chr1:114159000-114161400 Weak transcription Fetal Heart heart
31 chr1:114159000-114168600 Weak transcription Brain Hippocampus Middle brain
32 chr1:114159000-114172200 Weak transcription NH-A brain
33 chr1:114159000-114173200 Weak transcription HUES48 Cell Line embryonic stem cell
34 chr1:114159000-114195000 Weak transcription Foreskin Keratinocyte Primary Cells skin02 Skin
35 chr1:114159200-114161400 Weak transcription Colon Smooth Muscle Colon
36 chr1:114159200-114162200 Weak transcription Bone Marrow Derived Cultured Mesenchymal Stem Cells Bone marrow
37 chr1:114159200-114165200 Weak transcription H9 Derived Neuron Cultured Cells ES cell derived
38 chr1:114159200-114194800 Weak transcription Foreskin Keratinocyte Primary Cells skin03 Skin
39 chr1:114160200-114162800 Weak transcription Adipose Nuclei Adipose
40 chr1:114160400-114169800 Weak transcription Rectal Smooth Muscle rectum
41 chr1:114160600-114160800 Enhancers Brain Germinal Matrix brain
42 chr1:114160600-114161600 Enhancers Ganglion Eminence derived primary cultured neurospheres brain
43 chr1:114160600-114165400 Weak transcription Muscle Satellite Cultured Cells --
44 chr1:114160600-114165600 Weak transcription Osteobl bone
45 chr1:114160600-114168600 Weak transcription Mesenchymal Stem Cell Derived Chondrocyte Cultured Cells embryonic stem cell
46 chr1:114160600-114169000 Weak transcription Breast variant Human Mammary Epithelial Cells (vHMEC) Breast

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Last update: Aug 31, 2015