The 2.0 version of rSNPBase

Variant report

Variant rs1935838
Chromosome Location chr1:114317791-114317792
allele A/G
Outlinks Ensembl   UCSC
Chromatin state (count:121 , 50 per page) page: 1 2 3
No. Chromosome Location Chromatin state Cell line Tissue
1 chr1:114302600-114318000 Weak transcription Spleen Spleen
2 chr1:114302600-114321800 Weak transcription H1 BMP4 Derived Trophoblast Cultured Cells ES cell derived
3 chr1:114302800-114323200 Weak transcription Aorta Aorta
4 chr1:114302800-114323600 Weak transcription Psoas Muscle Psoas
5 chr1:114302800-114326000 Weak transcription Foreskin Melanocyte Primary Cells skin01 Skin
6 chr1:114302800-114326200 Weak transcription Pancreas Pancrea
7 chr1:114302800-114326200 Weak transcription Right Ventricle heart
8 chr1:114303000-114318800 Weak transcription Skeletal Muscle Male skeletal muscle
9 chr1:114303000-114319000 Weak transcription Fetal Brain Male brain
10 chr1:114303000-114319000 Weak transcription HSMMtube muscle
11 chr1:114303000-114323200 Weak transcription Fetal Heart heart
12 chr1:114303000-114326200 Weak transcription Foreskin Fibroblast Primary Cells skin02 Skin
13 chr1:114303200-114328400 Weak transcription A549 lung
14 chr1:114303400-114353800 Weak transcription H1 Derived Neuronal Progenitor Cultured Cells ES cell derived
15 chr1:114304800-114320600 Strong transcription Primary Natural Killer cells fromperipheralblood blood
16 chr1:114308200-114326600 Weak transcription Colonic Mucosa Colon
17 chr1:114309000-114323600 Weak transcription Gastric stomach
18 chr1:114309600-114353400 Weak transcription Placenta Amnion Placenta Amnion
19 chr1:114310200-114319000 Weak transcription Left Ventricle heart
20 chr1:114310600-114325400 Weak transcription Brain Dorsolateral Prefrontal Cortex brain
21 chr1:114310800-114318600 Weak transcription HSMM muscle
22 chr1:114310800-114319400 Weak transcription NH-A brain
23 chr1:114310800-114326000 Weak transcription HMEC breast
24 chr1:114311000-114318400 Weak transcription Mesenchymal Stem Cell Derived Adipocyte Cultured Cells ES cell derived
25 chr1:114311000-114318600 Weak transcription Hela-S3 cervix
26 chr1:114311000-114319000 Weak transcription Foreskin Keratinocyte Primary Cells skin03 Skin
27 chr1:114311000-114319000 Weak transcription Sigmoid Colon Sigmoid Colon
28 chr1:114311000-114319200 Weak transcription Osteobl bone
29 chr1:114311000-114323600 Weak transcription Lung lung
30 chr1:114311000-114324800 Weak transcription Muscle Satellite Cultured Cells --
31 chr1:114311000-114325800 Weak transcription Stomach Smooth Muscle stomach
32 chr1:114311000-114326200 Weak transcription HUVEC blood vessel
33 chr1:114311000-114335600 Weak transcription Foreskin Keratinocyte Primary Cells skin02 Skin
34 chr1:114311000-114336800 Weak transcription Fetal Kidney kidney
35 chr1:114311000-114341800 Weak transcription Esophagus oesophagus
36 chr1:114311200-114319000 Weak transcription Foreskin Melanocyte Primary Cells skin03 Skin
37 chr1:114311200-114325800 Weak transcription NHEK skin
38 chr1:114311400-114317800 Weak transcription Rectal Mucosa Donor 31 rectum
39 chr1:114311400-114318000 Weak transcription Primary B cells from peripheral blood blood
40 chr1:114311400-114318400 Weak transcription Bone Marrow Derived Cultured Mesenchymal Stem Cells Bone marrow
41 chr1:114311400-114318400 Weak transcription HepG2 liver
42 chr1:114311400-114318600 Weak transcription Breast variant Human Mammary Epithelial Cells (vHMEC) Breast
43 chr1:114312000-114318400 Weak transcription Adipose Nuclei Adipose
44 chr1:114312400-114318000 Weak transcription Brain Inferior Temporal Lobe brain
45 chr1:114312400-114321200 Weak transcription Primary T cells effector/memory enriched fromperipheralblood blood
46 chr1:114312400-114321200 Weak transcription Primary T killer naive cells fromperipheralblood blood
47 chr1:114312600-114318000 Weak transcription ES-UCSF4 Cell Line embryonic stem cell
48 chr1:114312600-114318400 Weak transcription Primary hematopoietic stem cells blood
49 chr1:114312600-114318400 Weak transcription Ganglion Eminence derived primary cultured neurospheres brain
50 chr1:114312600-114318800 Weak transcription Duodenum Smooth Muscle Duodenum

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Last update: Aug 31, 2015