The 2.0 version of rSNPBase

Variant report

Variant rs1230637
Chromosome Location chr1:114271423-114271424
allele A/G
Outlinks Ensembl   UCSC
Chromatin state (count:105 , 50 per page) page: 1 2 3
No. Chromosome Location Chromatin state Cell line Tissue
1 chr1:114203200-114298600 Weak transcription Fetal Brain Male brain
2 chr1:114216200-114279800 Weak transcription Stomach Smooth Muscle stomach
3 chr1:114228000-114287800 Weak transcription Rectal Mucosa Donor 31 rectum
4 chr1:114236400-114300000 Weak transcription Small Intestine intestine
5 chr1:114239200-114279800 Weak transcription Colon Smooth Muscle Colon
6 chr1:114240200-114279400 Weak transcription Psoas Muscle Psoas
7 chr1:114242000-114300000 Weak transcription Rectal Smooth Muscle rectum
8 chr1:114245400-114275000 Weak transcription Primary T helper 17 cells PMA-I stimulated --
9 chr1:114245600-114300600 Weak transcription Primary T cells effector/memory enriched fromperipheralblood blood
10 chr1:114248800-114290200 Weak transcription HMEC breast
11 chr1:114251000-114291400 Weak transcription Primary T regulatory cells fromperipheralblood blood
12 chr1:114253000-114279400 Weak transcription Rectal Mucosa Donor 29 rectum
13 chr1:114253000-114279600 Weak transcription Skeletal Muscle Female skeletal muscle
14 chr1:114254000-114272200 Weak transcription HSMMtube muscle
15 chr1:114254600-114277000 Weak transcription Adipose Nuclei Adipose
16 chr1:114254800-114271800 Weak transcription Breast variant Human Mammary Epithelial Cells (vHMEC) Breast
17 chr1:114256600-114283600 Weak transcription Brain Anterior Caudate brain
18 chr1:114256600-114288800 Weak transcription K562 blood
19 chr1:114256800-114277200 Weak transcription Brain Inferior Temporal Lobe brain
20 chr1:114257600-114283000 Weak transcription Brain Dorsolateral Prefrontal Cortex brain
21 chr1:114257600-114296200 Weak transcription Pancreas Pancrea
22 chr1:114258000-114300000 Weak transcription Right Ventricle heart
23 chr1:114261400-114277200 Weak transcription HepG2 liver
24 chr1:114261400-114279000 Weak transcription Spleen Spleen
25 chr1:114261400-114300000 Weak transcription Pancreatic Islets Pancreatic Islet
26 chr1:114261400-114300600 Weak transcription Skeletal Muscle Male skeletal muscle
27 chr1:114261400-114301000 Weak transcription Lung lung
28 chr1:114261600-114272200 Weak transcription Sigmoid Colon Sigmoid Colon
29 chr1:114261600-114280200 Weak transcription Brain Cingulate Gyrus brain
30 chr1:114261600-114300200 Weak transcription Brain Angular Gyrus brain
31 chr1:114261600-114300600 Weak transcription Aorta Aorta
32 chr1:114261600-114300600 Weak transcription Esophagus oesophagus
33 chr1:114261600-114300600 Weak transcription Gastric stomach
34 chr1:114262000-114272000 Weak transcription iPS DF 6.9 Cell Line embryonic stem cell
35 chr1:114262000-114286400 Weak transcription Brain Hippocampus Middle brain
36 chr1:114263600-114285400 Weak transcription Duodenum Mucosa Duodenum
37 chr1:114263600-114300000 Weak transcription Fetal Lung lung
38 chr1:114263600-114300400 Weak transcription Fetal Intestine Large intestine
39 chr1:114263800-114274000 Weak transcription H1 Derived Mesenchymal Stem Cells ES cell derived
40 chr1:114263800-114277200 Weak transcription Foreskin Fibroblast Primary Cells skin01 Skin
41 chr1:114263800-114279200 Weak transcription H1 Derived Neuronal Progenitor Cultured Cells ES cell derived
42 chr1:114263800-114279200 Weak transcription Fetal Muscle Trunk muscle
43 chr1:114263800-114279800 Weak transcription Brain Germinal Matrix brain
44 chr1:114264000-114272000 Weak transcription Primary B cells from cord blood blood
45 chr1:114264000-114277000 Weak transcription Hela-S3 cervix
46 chr1:114264000-114279200 Weak transcription Fetal Kidney kidney
47 chr1:114264000-114300400 Weak transcription Breast Myoepithelial Primary Cells Breast
48 chr1:114264200-114271800 Weak transcription NH-A brain
49 chr1:114264200-114272200 Weak transcription Foreskin Melanocyte Primary Cells skin01 Skin
50 chr1:114264200-114277000 Weak transcription Duodenum Smooth Muscle Duodenum

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Last update: Aug 31, 2015