The 2.0 version of rSNPBase

Variant report

Variant rs4838997
Chromosome Location chr1:114225306-114225307
allele A/G
Outlinks Ensembl   UCSC
Chromatin state (count:88 , 50 per page) page: 1 2
No. Chromosome Location Chromatin state Cell line Tissue
1 chr1:114171600-114241400 Weak transcription Right Ventricle heart
2 chr1:114173000-114226800 Weak transcription Aorta Aorta
3 chr1:114173800-114236000 Weak transcription H1 Derived Mesenchymal Stem Cells ES cell derived
4 chr1:114179800-114239600 Weak transcription Spleen Spleen
5 chr1:114183000-114235800 Weak transcription Dnd41 blood
6 chr1:114185400-114228000 Weak transcription HepG2 liver
7 chr1:114196600-114226400 Weak transcription Gastric stomach
8 chr1:114200200-114227800 Weak transcription Stomach Mucosa stomach
9 chr1:114202000-114241400 Weak transcription Brain Dorsolateral Prefrontal Cortex brain
10 chr1:114203000-114232000 Weak transcription Fetal Brain Female brain
11 chr1:114203000-114237800 Weak transcription NH-A brain
12 chr1:114203200-114232200 Weak transcription Foreskin Melanocyte Primary Cells skin03 Skin
13 chr1:114203200-114237600 Weak transcription Brain Cingulate Gyrus brain
14 chr1:114203200-114298600 Weak transcription Fetal Brain Male brain
15 chr1:114203400-114237800 Weak transcription Brain Angular Gyrus brain
16 chr1:114206600-114226400 Weak transcription NHLF lung
17 chr1:114206600-114229800 Weak transcription Mesenchymal Stem Cell Derived Chondrocyte Cultured Cells embryonic stem cell
18 chr1:114207400-114230600 Weak transcription NHEK skin
19 chr1:114209600-114229600 Weak transcription Bone Marrow Derived Cultured Mesenchymal Stem Cells Bone marrow
20 chr1:114209800-114232400 Weak transcription Primary hematopoietic stem cells blood
21 chr1:114211200-114231400 Weak transcription Primary T helper cells fromperipheralblood blood
22 chr1:114211600-114234600 Weak transcription Brain Germinal Matrix brain
23 chr1:114213400-114225400 Weak transcription Cortex derived primary cultured neurospheres brain
24 chr1:114213600-114232000 Weak transcription hESC Derived CD56+ Ectoderm Cultured Cells ES cell derived
25 chr1:114213600-114241600 Weak transcription Foreskin Fibroblast Primary Cells skin02 Skin
26 chr1:114214800-114232400 Weak transcription H1 Derived Neuronal Progenitor Cultured Cells ES cell derived
27 chr1:114215000-114226800 Weak transcription Ovary ovary
28 chr1:114215400-114235800 Weak transcription Esophagus oesophagus
29 chr1:114215400-114235800 Weak transcription Lung lung
30 chr1:114216000-114247000 Weak transcription HMEC breast
31 chr1:114216200-114225800 Weak transcription Fetal Adrenal Gland Adrenal Gland
32 chr1:114216200-114241600 Weak transcription Pancreas Pancrea
33 chr1:114216200-114279800 Weak transcription Stomach Smooth Muscle stomach
34 chr1:114216400-114232000 Weak transcription Ganglion Eminence derived primary cultured neurospheres brain
35 chr1:114216400-114250400 Weak transcription Placenta Placenta
36 chr1:114216600-114225600 Weak transcription hESC Derived CD56+ Mesoderm Cultured Cells ES cell derived
37 chr1:114216600-114225600 Weak transcription Duodenum Mucosa Duodenum
38 chr1:114216600-114227600 Weak transcription Fetal Thymus thymus
39 chr1:114216800-114226400 Weak transcription Primary T cells from cord blood blood
40 chr1:114217800-114226000 Weak transcription Fetal Stomach stomach
41 chr1:114218000-114235800 Weak transcription Psoas Muscle Psoas
42 chr1:114218200-114225600 Weak transcription Sigmoid Colon Sigmoid Colon
43 chr1:114218200-114227400 Weak transcription Breast variant Human Mammary Epithelial Cells (vHMEC) Breast
44 chr1:114218200-114240000 Weak transcription IMR90 fetal lung fibroblasts Cell Line lung
45 chr1:114218800-114225800 Weak transcription Primary monocytes fromperipheralblood blood
46 chr1:114220200-114226000 Weak transcription Adipose Nuclei Adipose
47 chr1:114220200-114229600 Weak transcription Osteobl bone
48 chr1:114220200-114232200 Weak transcription H1 BMP4 Derived Trophoblast Cultured Cells ES cell derived
49 chr1:114220400-114225400 Weak transcription Fetal Lung lung
50 chr1:114220400-114263800 Weak transcription Fetal Kidney kidney

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Last update: Aug 31, 2015