Variant report

Variant rs1217228
Chromosome Location chr1:114139359-114139360
allele A/C
Outlinks Ensembl   UCSC
Chromatin state (count:76 , 50 per page) page: 1 2
No. Chromosome Location Chromatin state Cell line Tissue
1 chr1:114100600-114140200 Weak transcription Left Ventricle heart
2 chr1:114100600-114173400 Weak transcription Gastric stomach
3 chr1:114110800-114139600 Weak transcription Breast variant Human Mammary Epithelial Cells (vHMEC) Breast
4 chr1:114119000-114140400 Weak transcription Fetal Stomach stomach
5 chr1:114119200-114140400 Weak transcription Esophagus oesophagus
6 chr1:114119200-114145200 Weak transcription Lung lung
7 chr1:114119200-114172400 Weak transcription Pancreas Pancrea
8 chr1:114119200-114173000 Weak transcription Sigmoid Colon Sigmoid Colon
9 chr1:114122800-114142600 Weak transcription Placenta Amnion Placenta Amnion
10 chr1:114123400-114139600 Weak transcription Fetal Heart heart
11 chr1:114124200-114140200 Weak transcription Fetal Adrenal Gland Adrenal Gland
12 chr1:114124400-114172400 Weak transcription Aorta Aorta
13 chr1:114124800-114139600 Weak transcription Fetal Brain Male brain
14 chr1:114126600-114139400 Weak transcription Bone Marrow Derived Cultured Mesenchymal Stem Cells Bone marrow
15 chr1:114126600-114139400 Weak transcription HSMM muscle
16 chr1:114126600-114157200 Weak transcription HUVEC blood vessel
17 chr1:114127000-114139600 Weak transcription Skeletal Muscle Female skeletal muscle
18 chr1:114127400-114139400 Weak transcription Foreskin Melanocyte Primary Cells skin03 Skin
19 chr1:114128000-114139600 Weak transcription HepG2 liver
20 chr1:114128000-114140000 Weak transcription Ovary ovary
21 chr1:114132600-114143200 Weak transcription NH-A brain
22 chr1:114133400-114141000 Weak transcription HMEC breast
23 chr1:114134200-114139400 Weak transcription Foreskin Keratinocyte Primary Cells skin03 Skin
24 chr1:114134600-114166400 Weak transcription Hela-S3 cervix
25 chr1:114135400-114140600 Weak transcription H1 BMP4 Derived Trophoblast Cultured Cells ES cell derived
26 chr1:114135400-114141600 Weak transcription Skeletal Muscle Male skeletal muscle
27 chr1:114135600-114139600 Weak transcription HUES64 Cell Line embryonic stem cell
28 chr1:114135800-114141800 Weak transcription Primary T helper 17 cells PMA-I stimulated --
29 chr1:114136200-114141200 Strong transcription Rectal Mucosa Donor 31 rectum
30 chr1:114136600-114139400 Strong transcription Adipose Derived Mesenchymal Stem Cell Cultured Cells ES cell derived
31 chr1:114136600-114139400 Weak transcription Fetal Brain Female brain
32 chr1:114136600-114139600 Weak transcription HUES6 Cell Line embryonic stem cell
33 chr1:114136600-114139600 Strong transcription Liver Liver
34 chr1:114136600-114140800 Strong transcription Rectal Mucosa Donor 29 rectum
35 chr1:114136800-114139600 Strong transcription Duodenum Mucosa Duodenum
36 chr1:114136800-114140400 Strong transcription Placenta Placenta
37 chr1:114136800-114142000 Weak transcription Brain Angular Gyrus brain
38 chr1:114136800-114158800 Weak transcription Stomach Smooth Muscle stomach
39 chr1:114137000-114140200 Weak transcription Mesenchymal Stem Cell Derived Chondrocyte Cultured Cells embryonic stem cell
40 chr1:114137000-114141800 ZNF genes & repeats hESC Derived CD184+ Endoderm Cultured Cells ES cell derived
41 chr1:114137000-114142000 Weak transcription HSMMtube muscle
42 chr1:114137000-114142400 Weak transcription Fetal Thymus thymus
43 chr1:114137000-114144000 Weak transcription Colon Smooth Muscle Colon
44 chr1:114137000-114145200 Weak transcription HUES48 Cell Line embryonic stem cell
45 chr1:114137200-114139600 Weak transcription Rectal Smooth Muscle rectum
46 chr1:114137200-114140000 Weak transcription IMR90 fetal lung fibroblasts Cell Line lung
47 chr1:114137200-114140000 Strong transcription Adipose Nuclei Adipose
48 chr1:114137400-114140400 Weak transcription Foreskin Keratinocyte Primary Cells skin02 Skin
49 chr1:114137400-114141400 Weak transcription Foreskin Fibroblast Primary Cells skin01 Skin
50 chr1:114137600-114139600 Weak transcription Brain Dorsolateral Prefrontal Cortex brain

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