The 2.0 version of rSNPBase

Variant report

Variant rs12044534
Chromosome Location chr1:114319416-114319417
allele C/G
Outlinks Ensembl   UCSC
Chromatin state (count:121 , 50 per page) page: 1 2 3
No. Chromosome Location Chromatin state Cell line Tissue
1 chr1:114302600-114321800 Weak transcription H1 BMP4 Derived Trophoblast Cultured Cells ES cell derived
2 chr1:114302800-114323200 Weak transcription Aorta Aorta
3 chr1:114302800-114323600 Weak transcription Psoas Muscle Psoas
4 chr1:114302800-114326000 Weak transcription Foreskin Melanocyte Primary Cells skin01 Skin
5 chr1:114302800-114326200 Weak transcription Pancreas Pancrea
6 chr1:114302800-114326200 Weak transcription Right Ventricle heart
7 chr1:114303000-114323200 Weak transcription Fetal Heart heart
8 chr1:114303000-114326200 Weak transcription Foreskin Fibroblast Primary Cells skin02 Skin
9 chr1:114303200-114328400 Weak transcription A549 lung
10 chr1:114303400-114353800 Weak transcription H1 Derived Neuronal Progenitor Cultured Cells ES cell derived
11 chr1:114304800-114320600 Strong transcription Primary Natural Killer cells fromperipheralblood blood
12 chr1:114308200-114326600 Weak transcription Colonic Mucosa Colon
13 chr1:114309000-114323600 Weak transcription Gastric stomach
14 chr1:114309600-114353400 Weak transcription Placenta Amnion Placenta Amnion
15 chr1:114310600-114325400 Weak transcription Brain Dorsolateral Prefrontal Cortex brain
16 chr1:114310800-114326000 Weak transcription HMEC breast
17 chr1:114311000-114323600 Weak transcription Lung lung
18 chr1:114311000-114324800 Weak transcription Muscle Satellite Cultured Cells --
19 chr1:114311000-114325800 Weak transcription Stomach Smooth Muscle stomach
20 chr1:114311000-114326200 Weak transcription HUVEC blood vessel
21 chr1:114311000-114335600 Weak transcription Foreskin Keratinocyte Primary Cells skin02 Skin
22 chr1:114311000-114336800 Weak transcription Fetal Kidney kidney
23 chr1:114311000-114341800 Weak transcription Esophagus oesophagus
24 chr1:114311200-114325800 Weak transcription NHEK skin
25 chr1:114312400-114321200 Weak transcription Primary T cells effector/memory enriched fromperipheralblood blood
26 chr1:114312400-114321200 Weak transcription Primary T killer naive cells fromperipheralblood blood
27 chr1:114312600-114322600 Weak transcription Brain Substantia Nigra brain
28 chr1:114312600-114323600 Weak transcription Right Atrium heart
29 chr1:114312600-114323600 Weak transcription Small Intestine intestine
30 chr1:114312600-114328800 Weak transcription H9 Cell Line embryonic stem cell
31 chr1:114312800-114321000 Weak transcription Primary T helper memory cells from peripheral blood 1 blood
32 chr1:114313200-114323600 Weak transcription Pancreatic Islets Pancreatic Islet
33 chr1:114313400-114320400 Strong transcription Dnd41 blood
34 chr1:114313400-114323600 Weak transcription Brain Cingulate Gyrus brain
35 chr1:114313400-114323800 Weak transcription Brain Angular Gyrus brain
36 chr1:114314000-114323400 Weak transcription ES-I3 Cell Line embryonic stem cell
37 chr1:114314200-114320000 Strong transcription Primary T helper cells fromperipheralblood blood
38 chr1:114314200-114323600 Weak transcription iPS-15b Cell Line embryonic stem cell
39 chr1:114314400-114320400 Strong transcription Monocytes-CD14+_RO01746 blood
40 chr1:114314600-114320400 Strong transcription H9 Derived Neuronal Progenitor Cultured Cells ES cell derived
41 chr1:114315200-114320600 Strong transcription Primary T cells fromperipheralblood blood
42 chr1:114315400-114319600 Strong transcription Primary hematopoietic stem cells G-CSF-mobilized Male --
43 chr1:114315800-114320000 Strong transcription Primary monocytes fromperipheralblood blood
44 chr1:114315800-114320000 Strong transcription Primary mononuclear cells fromperipheralblood Blood
45 chr1:114315800-114320000 Strong transcription Fetal Intestine Small intestine
46 chr1:114315800-114320600 Strong transcription IMR90 fetal lung fibroblasts Cell Line lung
47 chr1:114315800-114320600 Strong transcription Fetal Stomach stomach
48 chr1:114316000-114320400 Strong transcription Fetal Adrenal Gland Adrenal Gland
49 chr1:114316000-114320400 Strong transcription Fetal Intestine Large intestine
50 chr1:114316000-114320600 Strong transcription Fetal Thymus thymus

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Last update: Aug 31, 2015