The 2.0 version of rSNPBase

Variant report

Variant rs12063216
Chromosome Location chr1:114277330-114277331
allele A/G
Outlinks Ensembl   UCSC
Chromatin state (count:106 , 50 per page) page: 1 2 3
No. Chromosome Location Chromatin state Cell line Tissue
1 chr1:114203200-114298600 Weak transcription Fetal Brain Male brain
2 chr1:114216200-114279800 Weak transcription Stomach Smooth Muscle stomach
3 chr1:114228000-114287800 Weak transcription Rectal Mucosa Donor 31 rectum
4 chr1:114236400-114300000 Weak transcription Small Intestine intestine
5 chr1:114239200-114279800 Weak transcription Colon Smooth Muscle Colon
6 chr1:114240200-114279400 Weak transcription Psoas Muscle Psoas
7 chr1:114242000-114300000 Weak transcription Rectal Smooth Muscle rectum
8 chr1:114245600-114300600 Weak transcription Primary T cells effector/memory enriched fromperipheralblood blood
9 chr1:114248800-114290200 Weak transcription HMEC breast
10 chr1:114251000-114291400 Weak transcription Primary T regulatory cells fromperipheralblood blood
11 chr1:114253000-114279400 Weak transcription Rectal Mucosa Donor 29 rectum
12 chr1:114253000-114279600 Weak transcription Skeletal Muscle Female skeletal muscle
13 chr1:114256600-114283600 Weak transcription Brain Anterior Caudate brain
14 chr1:114256600-114288800 Weak transcription K562 blood
15 chr1:114257600-114283000 Weak transcription Brain Dorsolateral Prefrontal Cortex brain
16 chr1:114257600-114296200 Weak transcription Pancreas Pancrea
17 chr1:114258000-114300000 Weak transcription Right Ventricle heart
18 chr1:114261400-114279000 Weak transcription Spleen Spleen
19 chr1:114261400-114300000 Weak transcription Pancreatic Islets Pancreatic Islet
20 chr1:114261400-114300600 Weak transcription Skeletal Muscle Male skeletal muscle
21 chr1:114261400-114301000 Weak transcription Lung lung
22 chr1:114261600-114280200 Weak transcription Brain Cingulate Gyrus brain
23 chr1:114261600-114300200 Weak transcription Brain Angular Gyrus brain
24 chr1:114261600-114300600 Weak transcription Aorta Aorta
25 chr1:114261600-114300600 Weak transcription Esophagus oesophagus
26 chr1:114261600-114300600 Weak transcription Gastric stomach
27 chr1:114262000-114286400 Weak transcription Brain Hippocampus Middle brain
28 chr1:114263600-114285400 Weak transcription Duodenum Mucosa Duodenum
29 chr1:114263600-114300000 Weak transcription Fetal Lung lung
30 chr1:114263600-114300400 Weak transcription Fetal Intestine Large intestine
31 chr1:114263800-114279200 Weak transcription H1 Derived Neuronal Progenitor Cultured Cells ES cell derived
32 chr1:114263800-114279200 Weak transcription Fetal Muscle Trunk muscle
33 chr1:114263800-114279800 Weak transcription Brain Germinal Matrix brain
34 chr1:114264000-114279200 Weak transcription Fetal Kidney kidney
35 chr1:114264000-114300400 Weak transcription Breast Myoepithelial Primary Cells Breast
36 chr1:114264200-114279200 Weak transcription Fetal Muscle Leg muscle
37 chr1:114264200-114300000 Weak transcription Foreskin Fibroblast Primary Cells skin02 Skin
38 chr1:114264400-114288200 Weak transcription H1 Cell Line embryonic stem cell
39 chr1:114264800-114290200 Weak transcription Foreskin Keratinocyte Primary Cells skin02 Skin
40 chr1:114265000-114283600 Strong transcription Primary hematopoietic stem cells G-CSF-mobilized Male --
41 chr1:114265000-114291200 Weak transcription Foreskin Keratinocyte Primary Cells skin03 Skin
42 chr1:114265200-114283600 Strong transcription hESC Derived CD56+ Mesoderm Cultured Cells ES cell derived
43 chr1:114265400-114277600 Strong transcription Primary hematopoietic stem cells G-CSF-mobilized Female --
44 chr1:114265600-114281000 Strong transcription Primary hematopoietic stem cells short term culture blood
45 chr1:114267000-114279200 Weak transcription Placenta Placenta
46 chr1:114267200-114290000 Weak transcription NHEK skin
47 chr1:114267400-114299400 Weak transcription Primary T cells fromperipheralblood blood
48 chr1:114267400-114300000 Weak transcription ES-I3 Cell Line embryonic stem cell
49 chr1:114268200-114279000 Weak transcription ES-UCSF4 Cell Line embryonic stem cell
50 chr1:114268400-114279400 Weak transcription hESC Derived CD56+ Ectoderm Cultured Cells ES cell derived

Quick Search:


  
Input of quick search could be:

what's new

Quick links

Copyright © 2015, Bioinformatics Lab, Institute of Psychology, Chinese Academy of Sciences. All Rights Reserved Feedback
Last update: Aug 31, 2015