The 2.0 version of rSNPBase

Variant report

Variant rs1230687
Chromosome Location chr1:114290959-114290960
allele A/T
Outlinks Ensembl   UCSC
Chromatin state (count:106 , 50 per page) page: 1 2 3
No. Chromosome Location Chromatin state Cell line Tissue
1 chr1:114203200-114298600 Weak transcription Fetal Brain Male brain
2 chr1:114236400-114300000 Weak transcription Small Intestine intestine
3 chr1:114242000-114300000 Weak transcription Rectal Smooth Muscle rectum
4 chr1:114245600-114300600 Weak transcription Primary T cells effector/memory enriched fromperipheralblood blood
5 chr1:114251000-114291400 Weak transcription Primary T regulatory cells fromperipheralblood blood
6 chr1:114257600-114296200 Weak transcription Pancreas Pancrea
7 chr1:114258000-114300000 Weak transcription Right Ventricle heart
8 chr1:114261400-114300000 Weak transcription Pancreatic Islets Pancreatic Islet
9 chr1:114261400-114300600 Weak transcription Skeletal Muscle Male skeletal muscle
10 chr1:114261400-114301000 Weak transcription Lung lung
11 chr1:114261600-114300200 Weak transcription Brain Angular Gyrus brain
12 chr1:114261600-114300600 Weak transcription Aorta Aorta
13 chr1:114261600-114300600 Weak transcription Esophagus oesophagus
14 chr1:114261600-114300600 Weak transcription Gastric stomach
15 chr1:114263600-114300000 Weak transcription Fetal Lung lung
16 chr1:114263600-114300400 Weak transcription Fetal Intestine Large intestine
17 chr1:114264000-114300400 Weak transcription Breast Myoepithelial Primary Cells Breast
18 chr1:114264200-114300000 Weak transcription Foreskin Fibroblast Primary Cells skin02 Skin
19 chr1:114265000-114291200 Weak transcription Foreskin Keratinocyte Primary Cells skin03 Skin
20 chr1:114267400-114299400 Weak transcription Primary T cells fromperipheralblood blood
21 chr1:114267400-114300000 Weak transcription ES-I3 Cell Line embryonic stem cell
22 chr1:114268400-114292000 Weak transcription Primary B cells from peripheral blood blood
23 chr1:114268400-114298000 Weak transcription A549 lung
24 chr1:114268600-114292000 Weak transcription Primary mononuclear cells fromperipheralblood Blood
25 chr1:114268600-114292600 Weak transcription H1 BMP4 Derived Trophoblast Cultured Cells ES cell derived
26 chr1:114268600-114296200 Weak transcription Fetal Intestine Small intestine
27 chr1:114268800-114296400 Weak transcription NHLF lung
28 chr1:114268800-114299200 Weak transcription Fetal Brain Female brain
29 chr1:114269200-114296000 Weak transcription Ovary ovary
30 chr1:114272800-114300000 Weak transcription Primary B cells from cord blood blood
31 chr1:114275200-114292600 Weak transcription H1 Derived Mesenchymal Stem Cells ES cell derived
32 chr1:114277800-114299200 Weak transcription Brain Inferior Temporal Lobe brain
33 chr1:114279800-114291200 Weak transcription Fetal Stomach stomach
34 chr1:114279800-114300200 Weak transcription Fetal Kidney kidney
35 chr1:114280400-114299000 Weak transcription Brain Germinal Matrix brain
36 chr1:114280400-114300000 Weak transcription Psoas Muscle Psoas
37 chr1:114280400-114301400 Weak transcription Spleen Spleen
38 chr1:114280600-114291200 Weak transcription Fetal Adrenal Gland Adrenal Gland
39 chr1:114280600-114291800 Weak transcription Placenta Placenta
40 chr1:114280600-114296200 Weak transcription Fetal Muscle Trunk muscle
41 chr1:114280600-114300200 Weak transcription H1 Derived Neuronal Progenitor Cultured Cells ES cell derived
42 chr1:114280600-114300200 Weak transcription Stomach Smooth Muscle stomach
43 chr1:114280800-114291600 Weak transcription Duodenum Smooth Muscle Duodenum
44 chr1:114280800-114300000 Weak transcription Skeletal Muscle Female skeletal muscle
45 chr1:114281000-114292000 Weak transcription Hela-S3 cervix
46 chr1:114281200-114291800 Weak transcription iPS-18 Cell Line embryonic stem cell
47 chr1:114281200-114291800 Weak transcription Adipose Nuclei Adipose
48 chr1:114281200-114292000 Weak transcription Primary hematopoietic stem cells blood
49 chr1:114281200-114299200 Weak transcription Fetal Heart heart
50 chr1:114281200-114300000 Weak transcription Colon Smooth Muscle Colon

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Last update: Aug 31, 2015