Variant report

Variant rs2489130
Chromosome Location chr1:145013000-145013001
allele C/T
Outlinks Ensembl   UCSC
Chromatin state (count:84 , 50 per page) page: 1 2
No. Chromosome Location Chromatin state Cell line Tissue
1 chr1:145000800-145021600 Weak transcription Breast Myoepithelial Primary Cells Breast
2 chr1:145002800-145024200 Weak transcription Gastric stomach
3 chr1:145004000-145014800 Strong transcription Placenta Placenta
4 chr1:145004600-145016200 Weak transcription iPS DF 6.9 Cell Line embryonic stem cell
5 chr1:145005400-145014800 Weak transcription Fetal Intestine Small intestine
6 chr1:145006400-145014800 Weak transcription HUES6 Cell Line embryonic stem cell
7 chr1:145006600-145014400 Weak transcription HUES64 Cell Line embryonic stem cell
8 chr1:145006600-145016400 Weak transcription iPS-18 Cell Line embryonic stem cell
9 chr1:145008000-145013800 Weak transcription ES-UCSF4 Cell Line embryonic stem cell
10 chr1:145008000-145014800 Weak transcription H1 BMP4 Derived Mesendoderm Cultured Cells ES cell derived
11 chr1:145008200-145016800 Weak transcription Primary T killer memory cells from peripheral blood blood
12 chr1:145009600-145014800 Weak transcription Primary T cells from cord blood blood
13 chr1:145009800-145014200 Weak transcription iPS-20b Cell Line embryonic stem cell
14 chr1:145009800-145014800 Weak transcription Primary hematopoietic stem cells short term culture blood
15 chr1:145009800-145014800 Weak transcription Fetal Lung lung
16 chr1:145010000-145013200 Weak transcription NH-A brain
17 chr1:145010000-145014200 Weak transcription Fetal Stomach stomach
18 chr1:145010000-145014600 Weak transcription hESC Derived CD56+ Mesoderm Cultured Cells ES cell derived
19 chr1:145010000-145014800 Weak transcription ES-I3 Cell Line embryonic stem cell
20 chr1:145010000-145014800 Weak transcription Rectal Mucosa Donor 31 rectum
21 chr1:145010200-145013400 Enhancers K562 blood
22 chr1:145010200-145014800 Weak transcription Foreskin Keratinocyte Primary Cells skin03 Skin
23 chr1:145010400-145013800 Weak transcription Foreskin Melanocyte Primary Cells skin01 Skin
24 chr1:145010400-145014600 Weak transcription HMEC breast
25 chr1:145010400-145014600 Weak transcription NHEK skin
26 chr1:145010400-145014800 Weak transcription Foreskin Keratinocyte Primary Cells skin02 Skin
27 chr1:145010400-145014800 Weak transcription Rectal Smooth Muscle rectum
28 chr1:145010400-145014800 Weak transcription Right Atrium heart
29 chr1:145010600-145013000 Strong transcription Fetal Brain Male brain
30 chr1:145010600-145013400 Strong transcription HSMM muscle
31 chr1:145010600-145014400 Weak transcription Primary hematopoietic stem cells G-CSF-mobilized Female --
32 chr1:145010600-145014800 Weak transcription IMR90 fetal lung fibroblasts Cell Line lung
33 chr1:145010600-145014800 Weak transcription Colon Smooth Muscle Colon
34 chr1:145010600-145014800 Weak transcription Placenta Amnion Placenta Amnion
35 chr1:145010600-145014800 Strong transcription Skeletal Muscle Female skeletal muscle
36 chr1:145010600-145023600 Weak transcription H1 Derived Mesenchymal Stem Cells ES cell derived
37 chr1:145010800-145013200 Strong transcription HSMMtube muscle
38 chr1:145010800-145014000 Strong transcription Stomach Smooth Muscle stomach
39 chr1:145010800-145014200 Weak transcription Primary hematopoietic stem cells G-CSF-mobilized Male --
40 chr1:145010800-145014200 Weak transcription Duodenum Smooth Muscle Duodenum
41 chr1:145011000-145014200 Strong transcription Skeletal Muscle Male skeletal muscle
42 chr1:145011000-145014600 Weak transcription Primary hematopoietic stem cells blood
43 chr1:145011000-145014800 Strong transcription Breast variant Human Mammary Epithelial Cells (vHMEC) Breast
44 chr1:145011200-145013000 Strong transcription Foreskin Fibroblast Primary Cells skin02 Skin
45 chr1:145011200-145013800 Strong transcription Bone Marrow Derived Cultured Mesenchymal Stem Cells Bone marrow
46 chr1:145011200-145014000 Strong transcription Mesenchymal Stem Cell Derived Chondrocyte Cultured Cells embryonic stem cell
47 chr1:145011200-145014000 Strong transcription Fetal Muscle Trunk muscle
48 chr1:145011200-145014000 Strong transcription Osteobl bone
49 chr1:145011200-145014200 Strong transcription NHDF-Ad bronchial
50 chr1:145011200-145014400 Weak transcription Monocytes-CD14+_RO01746 blood

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