Variant report

Variant rs2500391
Chromosome Location chr1:145003887-145003888
allele A/G
Outlinks Ensembl   UCSC
Chromatin state (count:92 , 50 per page) page: 1 2
No. Chromosome Location Chromatin state Cell line Tissue
1 chr1:144991400-145004200 Strong transcription Mesenchymal Stem Cell Derived Chondrocyte Cultured Cells embryonic stem cell
2 chr1:144992600-145007800 Weak transcription HMEC breast
3 chr1:144995000-145005600 Weak transcription NH-A brain
4 chr1:144995800-145004800 Weak transcription Fetal Intestine Small intestine
5 chr1:144995800-145008600 Weak transcription Placenta Amnion Placenta Amnion
6 chr1:144996600-145008600 Weak transcription Foreskin Keratinocyte Primary Cells skin02 Skin
7 chr1:144997400-145007800 Weak transcription NHEK skin
8 chr1:144998000-145009000 Weak transcription Stomach Mucosa stomach
9 chr1:144999200-145004200 Weak transcription Liver Liver
10 chr1:144999200-145004400 Enhancers Pancreatic Islets Pancreatic Islet
11 chr1:144999200-145008600 Weak transcription Rectal Smooth Muscle rectum
12 chr1:144999400-145004000 Weak transcription Fetal Heart heart
13 chr1:145000200-145004400 Weak transcription Fetal Thymus thymus
14 chr1:145000400-145004000 Weak transcription Placenta Placenta
15 chr1:145000400-145004400 Weak transcription Primary T cells fromperipheralblood blood
16 chr1:145000400-145004400 Weak transcription Primary Natural Killer cells fromperipheralblood blood
17 chr1:145000400-145008400 Genic enhancers Muscle Satellite Cultured Cells --
18 chr1:145000400-145010200 Weak transcription H1 Derived Mesenchymal Stem Cells ES cell derived
19 chr1:145000600-145004200 Weak transcription Foreskin Keratinocyte Primary Cells skin03 Skin
20 chr1:145000600-145008000 Strong transcription Breast variant Human Mammary Epithelial Cells (vHMEC) Breast
21 chr1:145000800-145004000 Weak transcription Primary T helper cells PMA-I stimulated --
22 chr1:145000800-145004200 Weak transcription Primary T helper naive cells from peripheral blood blood
23 chr1:145000800-145004200 Weak transcription Primary T helper naive cells fromperipheralblood blood
24 chr1:145000800-145004200 Weak transcription Foreskin Melanocyte Primary Cells skin01 Skin
25 chr1:145000800-145004400 Weak transcription Primary mononuclear cells fromperipheralblood Blood
26 chr1:145000800-145006000 Weak transcription ES-I3 Cell Line embryonic stem cell
27 chr1:145000800-145009000 Weak transcription Cortex derived primary cultured neurospheres brain
28 chr1:145000800-145009000 Weak transcription Ganglion Eminence derived primary cultured neurospheres brain
29 chr1:145000800-145021600 Weak transcription Breast Myoepithelial Primary Cells Breast
30 chr1:145001000-145004000 Weak transcription Colon Smooth Muscle Colon
31 chr1:145001000-145004200 Weak transcription Primary hematopoietic stem cells G-CSF-mobilized Male --
32 chr1:145001000-145004200 Weak transcription Brain Angular Gyrus brain
33 chr1:145001000-145004200 Weak transcription Brain Hippocampus Middle brain
34 chr1:145001000-145004200 Weak transcription Brain Inferior Temporal Lobe brain
35 chr1:145001000-145004200 Weak transcription Right Ventricle heart
36 chr1:145001000-145004200 Weak transcription Stomach Smooth Muscle stomach
37 chr1:145001000-145004200 Weak transcription Spleen Spleen
38 chr1:145001000-145004400 Weak transcription Duodenum Smooth Muscle Duodenum
39 chr1:145001000-145004400 Weak transcription Fetal Brain Female brain
40 chr1:145001000-145004800 Weak transcription Fetal Stomach stomach
41 chr1:145001000-145005600 Weak transcription ES-UCSF4 Cell Line embryonic stem cell
42 chr1:145001000-145005800 Weak transcription iPS-18 Cell Line embryonic stem cell
43 chr1:145001000-145006000 Weak transcription ES-WA7 Cell Line embryonic stem cell
44 chr1:145001000-145006000 Weak transcription hESC Derived CD56+ Mesoderm Cultured Cells ES cell derived
45 chr1:145001000-145006000 Weak transcription HUES6 Cell Line embryonic stem cell
46 chr1:145001000-145006000 Weak transcription iPS-15b Cell Line embryonic stem cell
47 chr1:145001000-145006000 Weak transcription iPS-20b Cell Line embryonic stem cell
48 chr1:145001000-145008000 Weak transcription Primary hematopoietic stem cells G-CSF-mobilized Female --
49 chr1:145001000-145009000 Weak transcription Primary hematopoietic stem cells blood
50 chr1:145001200-145006200 Weak transcription HUES64 Cell Line embryonic stem cell

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