Variant report

Variant rs2442644
Chromosome Location chr1:145007883-145007884
allele A/G
Outlinks Ensembl   UCSC
Chromatin state (count:82 , 50 per page) page: 1 2
No. Chromosome Location Chromatin state Cell line Tissue
1 chr1:144995800-145008600 Weak transcription Placenta Amnion Placenta Amnion
2 chr1:144996600-145008600 Weak transcription Foreskin Keratinocyte Primary Cells skin02 Skin
3 chr1:144998000-145009000 Weak transcription Stomach Mucosa stomach
4 chr1:144999200-145008600 Weak transcription Rectal Smooth Muscle rectum
5 chr1:145000400-145008400 Genic enhancers Muscle Satellite Cultured Cells --
6 chr1:145000400-145010200 Weak transcription H1 Derived Mesenchymal Stem Cells ES cell derived
7 chr1:145000600-145008000 Strong transcription Breast variant Human Mammary Epithelial Cells (vHMEC) Breast
8 chr1:145000800-145009000 Weak transcription Cortex derived primary cultured neurospheres brain
9 chr1:145000800-145009000 Weak transcription Ganglion Eminence derived primary cultured neurospheres brain
10 chr1:145000800-145021600 Weak transcription Breast Myoepithelial Primary Cells Breast
11 chr1:145001000-145008000 Weak transcription Primary hematopoietic stem cells G-CSF-mobilized Female --
12 chr1:145001000-145009000 Weak transcription Primary hematopoietic stem cells blood
13 chr1:145001400-145008400 Weak transcription Monocytes-CD14+_RO01746 blood
14 chr1:145001600-145008400 Weak transcription Primary B cells from cord blood blood
15 chr1:145002800-145012000 Weak transcription Pancreas Pancrea
16 chr1:145002800-145024200 Weak transcription Gastric stomach
17 chr1:145004000-145014800 Strong transcription Placenta Placenta
18 chr1:145004600-145008000 Weak transcription Primary hematopoietic stem cells G-CSF-mobilized Male --
19 chr1:145004600-145009200 Weak transcription Colon Smooth Muscle Colon
20 chr1:145004600-145016200 Weak transcription iPS DF 6.9 Cell Line embryonic stem cell
21 chr1:145004800-145008600 Weak transcription Ovary ovary
22 chr1:145004800-145009400 Weak transcription Primary T helper 17 cells PMA-I stimulated --
23 chr1:145004800-145009600 Weak transcription Primary T helper naive cells from peripheral blood blood
24 chr1:145005000-145008600 Weak transcription Right Atrium heart
25 chr1:145005000-145010200 Weak transcription Lung lung
26 chr1:145005400-145014800 Weak transcription Fetal Intestine Small intestine
27 chr1:145005600-145009600 Weak transcription Psoas Muscle Psoas
28 chr1:145005800-145008600 Weak transcription Fetal Stomach stomach
29 chr1:145006000-145008000 Genic enhancers Bone Marrow Derived Cultured Mesenchymal Stem Cells Bone marrow
30 chr1:145006000-145009000 Genic enhancers HSMM muscle
31 chr1:145006200-145008200 Genic enhancers NHDF-Ad bronchial
32 chr1:145006200-145009400 Weak transcription Liver Liver
33 chr1:145006200-145012200 Weak transcription Fetal Brain Female brain
34 chr1:145006400-145008600 Enhancers Adipose Derived Mesenchymal Stem Cell Cultured Cells ES cell derived
35 chr1:145006400-145008600 Genic enhancers Mesenchymal Stem Cell Derived Chondrocyte Cultured Cells embryonic stem cell
36 chr1:145006400-145008600 Weak transcription Fetal Muscle Trunk muscle
37 chr1:145006400-145008600 Weak transcription NH-A brain
38 chr1:145006400-145009400 Weak transcription Left Ventricle heart
39 chr1:145006400-145009800 Weak transcription Right Ventricle heart
40 chr1:145006400-145014800 Weak transcription HUES6 Cell Line embryonic stem cell
41 chr1:145006600-145009000 Weak transcription Aorta Aorta
42 chr1:145006600-145009000 Genic enhancers HSMMtube muscle
43 chr1:145006600-145009400 Weak transcription H1 Derived Neuronal Progenitor Cultured Cells ES cell derived
44 chr1:145006600-145009400 Weak transcription Fetal Muscle Leg muscle
45 chr1:145006600-145010600 Weak transcription Brain Angular Gyrus brain
46 chr1:145006600-145014400 Weak transcription HUES64 Cell Line embryonic stem cell
47 chr1:145006600-145016400 Weak transcription iPS-18 Cell Line embryonic stem cell
48 chr1:145006800-145009200 Weak transcription Primary T cells from cord blood blood
49 chr1:145006800-145009400 Weak transcription H9 Cell Line embryonic stem cell
50 chr1:145007000-145008000 Weak transcription Pancreatic Islets Pancreatic Islet

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