Variant report
| Variant | rs2490445 |
|---|---|
| Chromosome Location | chr6:12544672-12544673 |
| allele | C/T |
| Outlinks | Ensembl UCSC |
| No. | Chromosome Location | Chromatin state | Cell line | Tissue |
|---|---|---|---|---|
| 1 | chr6:12537800-12545200 | Weak transcription | IMR90 fetal lung fibroblasts Cell Line | lung |
| 2 | chr6:12538000-12546200 | Weak transcription | H1 BMP4 Derived Mesendoderm Cultured Cells | ES cell derived |
| 3 | chr6:12539600-12545200 | Weak transcription | Osteobl | bone |
| 4 | chr6:12543800-12545000 | ZNF genes & repeats | GM12878-XiMat | blood |
| 5 | chr6:12543800-12545400 | Enhancers | Duodenum Mucosa | Duodenum |
| 6 | chr6:12543800-12545600 | Enhancers | Breast Myoepithelial Primary Cells | Breast |
| 7 | chr6:12543800-12546800 | Enhancers | Fetal Intestine Small | intestine |
| 8 | chr6:12543800-12547200 | Enhancers | Fetal Intestine Large | intestine |
| 9 | chr6:12544000-12544800 | Enhancers | Pancreatic Islets | Pancreatic Islet |
| 10 | chr6:12544000-12545200 | Weak transcription | NH-A | brain |
| 11 | chr6:12544000-12545800 | Weak transcription | A549 | lung |
| 12 | chr6:12544000-12546200 | Enhancers | Stomach Mucosa | stomach |
| 13 | chr6:12544000-12547200 | Enhancers | HUVEC | blood vessel |
| 14 | chr6:12544200-12544800 | Enhancers | Gastric | stomach |
| 15 | chr6:12544200-12545400 | Enhancers | H1 Derived Mesenchymal Stem Cells | ES cell derived |
| 16 | chr6:12544200-12547200 | Enhancers | Rectal Mucosa Donor 31 | rectum |
| 17 | chr6:12544400-12545400 | Enhancers | Fetal Adrenal Gland | Adrenal Gland |
| 18 | chr6:12544600-12544800 | Enhancers | Sigmoid Colon | Sigmoid Colon |
| 19 | chr6:12544600-12545400 | Enhancers | Aorta | Aorta |
| 20 | chr6:12544600-12545400 | Bivalent Enhancer | Small Intestine | intestine |
| 21 | chr6:12544600-12546400 | Enhancers | Mesenchymal Stem Cell Derived Adipocyte Cultured Cells | ES cell derived |
| 22 | chr6:12544600-12547200 | Enhancers | Foreskin Fibroblast Primary Cells skin01 | Skin |
| 23 | chr6:12544600-12549400 | Enhancers | HSMMtube | muscle |
