Variant report

rSNPs within LD-proxies of this variant (count:22)

rs_ID	r²[population]
rs10736411	0.89[AFR][1000 genomes];0.85[AMR][1000 genomes];0.94[EUR][1000 genomes];1.00[ASN][1000 genomes]
rs11488279	0.94[ASN][1000 genomes]
rs12074592	0.92[ASN][1000 genomes]
rs12091279	0.94[ASN][1000 genomes]
rs12094676	0.94[ASN][1000 genomes]
rs17130868	0.94[ASN][1000 genomes]
rs17130875	0.94[ASN][1000 genomes]
rs1948982	0.90[ASN][1000 genomes]
rs2456908	0.94[ASN][1000 genomes]
rs2661461	0.94[AFR][1000 genomes];1.00[ASN][1000 genomes]
rs2661472	0.89[AFR][1000 genomes];0.85[AMR][1000 genomes];0.94[EUR][1000 genomes];1.00[ASN][1000 genomes]
rs2661474	0.85[AMR][1000 genomes];0.88[EUR][1000 genomes];1.00[ASN][1000 genomes]
rs2661475	0.94[ASN][1000 genomes]
rs2784820	0.98[ASN][1000 genomes]
rs2784822	0.94[ASN][1000 genomes]
rs2842031	0.84[ASN][1000 genomes]
rs2842051	1.00[AFR][1000 genomes];1.00[AMR][1000 genomes];1.00[EUR][1000 genomes];1.00[ASN][1000 genomes]
rs72938337	0.94[ASN][1000 genomes]
rs72938352	0.94[ASN][1000 genomes]
rs72938354	0.94[ASN][1000 genomes]
rs7525958	0.90[ASN][1000 genomes]
rs9425147	0.98[ASN][1000 genomes]

Variant overlapped rSNPs/rCNVs (count:1 , 50 per page) page: 1

No.	Variant name	Chromosome position	Chromatin state	Related regulatory elements	Target genes	Extended variants	Associated traits
1	nsv508271	chr1:69522722-69547369	Enhancers Weak transcription Active TSS Flanking Active TSS Bivalent Enhancer ZNF genes & repeats	n/a	n/a	inside rSNPs	diseases

No data

Chromatin state (count:1 , 50 per page) page: 1

No.	Chromosome Location	Chromatin state	Cell line	Tissue
1	chr1:69535800-69557000	Weak transcription	iPS DF 6.9 Cell Line	embryonic stem cell

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