Variant report

Variant rs2498741
Chromosome Location chr6:114054114-114054115
allele C/G
Outlinks Ensembl   UCSC
Chromatin state (count:49 , 50 per page) page: 1
No. Chromosome Location Chromatin state Cell line Tissue
1 chr6:114052200-114055000 Enhancers Cortex derived primary cultured neurospheres brain
2 chr6:114052200-114055000 Enhancers Foreskin Melanocyte Primary Cells skin03 Skin
3 chr6:114053200-114054400 Enhancers hESC Derived CD56+ Ectoderm Cultured Cells ES cell derived
4 chr6:114053400-114054200 Enhancers Adipose Nuclei Adipose
5 chr6:114053400-114054200 Enhancers Colon Smooth Muscle Colon
6 chr6:114053400-114054200 Flanking Active TSS Fetal Muscle Leg muscle
7 chr6:114053400-114054200 Enhancers Stomach Mucosa stomach
8 chr6:114053400-114054400 Enhancers Fetal Stomach stomach
9 chr6:114053400-114054600 Flanking Active TSS H9 Derived Neuronal Progenitor Cultured Cells ES cell derived
10 chr6:114053400-114054800 Enhancers Adipose Derived Mesenchymal Stem Cell Cultured Cells ES cell derived
11 chr6:114053600-114054200 Enhancers Mesenchymal Stem Cell Derived Adipocyte Cultured Cells ES cell derived
12 chr6:114053600-114054200 Flanking Active TSS Mesenchymal Stem Cell Derived Chondrocyte Cultured Cells embryonic stem cell
13 chr6:114053600-114054200 Enhancers Foreskin Melanocyte Primary Cells skin01 Skin
14 chr6:114053600-114054200 Flanking Active TSS Brain Anterior Caudate brain
15 chr6:114053600-114054200 Flanking Active TSS Brain Hippocampus Middle brain
16 chr6:114053600-114054200 Enhancers Fetal Lung lung
17 chr6:114053600-114054200 Enhancers Placenta Placenta
18 chr6:114053600-114054200 Enhancers Left Ventricle heart
19 chr6:114053600-114054200 Enhancers Pancreas Pancrea
20 chr6:114053600-114054200 Enhancers Psoas Muscle Psoas
21 chr6:114053600-114054200 Enhancers Sigmoid Colon Sigmoid Colon
22 chr6:114053600-114054200 Flanking Active TSS Skeletal Muscle Male skeletal muscle
23 chr6:114053600-114054400 Enhancers Fetal Kidney kidney
24 chr6:114053600-114054400 Enhancers Rectal Smooth Muscle rectum
25 chr6:114053600-114054400 Enhancers HSMM muscle
26 chr6:114053600-114054400 Flanking Active TSS HSMMtube muscle
27 chr6:114053600-114054600 Flanking Active TSS H9 Derived Neuron Cultured Cells ES cell derived
28 chr6:114053600-114054600 Enhancers Breast Myoepithelial Primary Cells Breast
29 chr6:114053600-114055000 Enhancers NHDF-Ad bronchial
30 chr6:114053600-114056200 Weak transcription Bone Marrow Derived Cultured Mesenchymal Stem Cells Bone marrow
31 chr6:114053800-114054200 Enhancers H1 Cell Line embryonic stem cell
32 chr6:114053800-114054200 Enhancers IMR90 fetal lung fibroblasts Cell Line lung
33 chr6:114053800-114054200 Enhancers Fetal Muscle Trunk muscle
34 chr6:114053800-114054200 Enhancers Gastric stomach
35 chr6:114053800-114054200 Enhancers Ovary ovary
36 chr6:114053800-114054200 Enhancers NH-A brain
37 chr6:114053800-114054200 Enhancers NHLF lung
38 chr6:114053800-114054400 Enhancers Foreskin Fibroblast Primary Cells skin01 Skin
39 chr6:114053800-114054800 Active TSS Ganglion Eminence derived primary cultured neurospheres brain
40 chr6:114054000-114054200 Active TSS Brain Inferior Temporal Lobe brain
41 chr6:114054000-114054200 Flanking Active TSS Fetal Heart heart
42 chr6:114054000-114054200 Enhancers Rectal Mucosa Donor 29 rectum
43 chr6:114054000-114054200 Enhancers Skeletal Muscle Female skeletal muscle
44 chr6:114054000-114054200 Active TSS HepG2 liver
45 chr6:114054000-114054200 Active TSS Osteobl bone
46 chr6:114054000-114054400 Enhancers Brain Germinal Matrix brain
47 chr6:114054000-114056000 Weak transcription Right Atrium heart
48 chr6:114054000-114056200 Weak transcription Muscle Satellite Cultured Cells --
49 chr6:114054000-114063200 Weak transcription Pancreatic Islets Pancreatic Islet

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