Variant report
| Variant | rs2504188 |
|---|---|
| Chromosome Location | chr10:26003576-26003577 |
| allele | A/G |
| Outlinks | Ensembl UCSC |
- TF binding region (count:0)
- CpG islands (count:0)
- Chromatin interactive region (count:0)
- LncRNA region (count:0)
- Mature miRNA region (count: 0)
- miRNA target sites (count:0)
| No data |
| No data |
| No data |
| No data |
| No data |
| No data |
| No data |
rSNPs within LD-proxies of this variant (count:38)
| rs_ID | r2[population] |
|---|---|
| rs10828861 | 0.90[ASN][1000 genomes] |
| rs11014706 | 0.86[ASN][1000 genomes] |
| rs11014710 | 0.83[ASN][1000 genomes] |
| rs2254980 | 0.81[ASN][1000 genomes] |
| rs2367972 | 0.81[ASN][1000 genomes] |
| rs2367973 | 0.87[AMR][1000 genomes];0.98[ASN][1000 genomes] |
| rs2442871 | 0.92[ASN][1000 genomes] |
| rs2442872 | 0.86[ASN][1000 genomes] |
| rs2442873 | 0.86[ASN][1000 genomes] |
| rs2442877 | 0.85[ASN][1000 genomes] |
| rs2442878 | 0.86[ASN][1000 genomes] |
| rs2442879 | 0.92[ASN][1000 genomes] |
| rs2442881 | 0.86[ASN][1000 genomes] |
| rs2442882 | 0.86[ASN][1000 genomes] |
| rs2442886 | 0.82[AMR][1000 genomes];0.92[ASN][1000 genomes] |
| rs2442887 | 0.83[AMR][1000 genomes];0.92[ASN][1000 genomes] |
| rs2442893 | 0.81[ASN][1000 genomes] |
| rs2442894 | 0.84[ASN][1000 genomes] |
| rs2442895 | 0.80[ASN][1000 genomes] |
| rs2442897 | 0.86[ASN][1000 genomes] |
| rs2442898 | 0.86[ASN][1000 genomes] |
| rs2504190 | 0.86[ASN][1000 genomes] |
| rs2504192 | 0.80[ASN][1000 genomes] |
| rs2504193 | 0.84[ASN][1000 genomes] |
| rs2504197 | 0.86[ASN][1000 genomes] |
| rs2504202 | 0.86[ASN][1000 genomes] |
| rs2504203 | 0.86[ASN][1000 genomes] |
| rs2505423 | 0.82[AMR][1000 genomes];0.94[ASN][1000 genomes] |
| rs2505426 | 0.85[AMR][1000 genomes];0.93[ASN][1000 genomes] |
| rs2505444 | 0.86[ASN][1000 genomes] |
| rs2887128 | 0.86[ASN][1000 genomes] |
| rs2923025 | 0.86[ASN][1000 genomes] |
| rs2923029 | 0.80[ASN][1000 genomes] |
| rs35830247 | 0.80[ASN][1000 genomes] |
| rs4625357 | 0.86[ASN][1000 genomes] |
| rs4749074 | 0.86[ASN][1000 genomes] |
| rs57262748 | 0.84[ASN][1000 genomes] |
| rs9417445 | 0.86[ASN][1000 genomes] |
| No data |
| No. | Chromosome Location | Chromatin state | Cell line | Tissue |
|---|---|---|---|---|
| 1 | chr10:26003200-26004600 | Weak transcription | iPS-18 Cell Line | embryonic stem cell |
