Variant report

Variant	rs2504906
Chromosome Location	chr6:12532612-12532613
allele	C/T
Outlinks	Ensembl UCSC

Chromatin state
Related regulatory elements
Target genes
Other information

Extended variants
information (count: 7 )
Associated
traits (count: 0)

rSNPs within LD-proxies of this variant (count:7)

rs_ID	r²[population]
rs12665596	0.81[ASN][1000 genomes]
rs17698884	0.83[AMR][1000 genomes];0.93[EUR][1000 genomes];0.85[ASN][1000 genomes]
rs2504857	0.85[ASN][1000 genomes]
rs55779406	0.83[AMR][1000 genomes];0.96[EUR][1000 genomes]
rs56388817	0.87[AMR][1000 genomes];0.94[EUR][1000 genomes];0.85[ASN][1000 genomes]
rs7745473	0.83[AMR][1000 genomes];0.96[EUR][1000 genomes]
rs9918358	0.94[EUR][1000 genomes]

No data

Chromatin state (count:6 , 50 per page) page: 1

No.	Chromosome Location	Chromatin state	Cell line	Tissue
1	chr6:12530200-12534200	Weak transcription	Placenta Amnion	Placenta Amnion
2	chr6:12530600-12534400	Weak transcription	hESC Derived CD56+ Mesoderm Cultured Cells	ES cell derived
3	chr6:12530800-12533600	Weak transcription	HUVEC	blood vessel
4	chr6:12530800-12537200	Weak transcription	H1 BMP4 Derived Mesendoderm Cultured Cells	ES cell derived
5	chr6:12531000-12537000	Weak transcription	Fetal Adrenal Gland	Adrenal Gland
6	chr6:12531000-12538400	Weak transcription	H1 BMP4 Derived Trophoblast Cultured Cells	ES cell derived

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dbSNP/dbVar ID: rs12345 /nsv7879
a single nucleotide as 0-based coordinates: chr1:12345
chromosomal regions: chr1:12345-34567

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