Variant report

Variant	rs7745473
Chromosome Location	chr6:12540827-12540828
allele	A/C
Outlinks	Ensembl UCSC

Chromatin state
Related regulatory elements
Target genes
Other information

Extended variants
information (count: 10 )
Associated
traits (count: 0)

rSNPs within LD-proxies of this variant (count:10)

rs_ID	r²[population]
rs17698884	0.92[AFR][1000 genomes];1.00[AMR][1000 genomes];0.97[EUR][1000 genomes]
rs2504906	0.83[AMR][1000 genomes];0.96[EUR][1000 genomes]
rs55779406	0.97[AFR][1000 genomes];1.00[AMR][1000 genomes];1.00[EUR][1000 genomes];0.98[ASN][1000 genomes]
rs56285024	0.84[ASN][1000 genomes]
rs56388817	0.95[AMR][1000 genomes];0.98[EUR][1000 genomes]
rs67172952	0.84[ASN][1000 genomes]
rs6911027	0.87[ASN][1000 genomes]
rs9296411	1.00[ASN][1000 genomes]
rs9296412	1.00[ASN][1000 genomes]
rs9918358	0.88[AMR][1000 genomes];0.98[EUR][1000 genomes];1.00[ASN][1000 genomes]

No data

Chromatin state (count:9 , 50 per page) page: 1

No.	Chromosome Location	Chromatin state	Cell line	Tissue
1	chr6:12537800-12545200	Weak transcription	IMR90 fetal lung fibroblasts Cell Line	lung
2	chr6:12538000-12546200	Weak transcription	H1 BMP4 Derived Mesendoderm Cultured Cells	ES cell derived
3	chr6:12539400-12544600	Weak transcription	Aorta	Aorta
4	chr6:12539600-12543800	Weak transcription	Duodenum Mucosa	Duodenum
5	chr6:12539600-12544000	Weak transcription	Stomach Mucosa	stomach
6	chr6:12539600-12545200	Weak transcription	Osteobl	bone
7	chr6:12540000-12543800	Weak transcription	Fetal Intestine Small	intestine
8	chr6:12540200-12543800	Weak transcription	Fetal Intestine Large	intestine
9	chr6:12540400-12544000	Weak transcription	HUVEC	blood vessel

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Input of quick search could be:

dbSNP/dbVar ID: rs12345 /nsv7879
a single nucleotide as 0-based coordinates: chr1:12345
chromosomal regions: chr1:12345-34567

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