Variant report

Variant	rs251895
Chromosome Location	chr5:61012775-61012776
allele	A/T
Outlinks	Ensembl UCSC

Chromatin state
Related regulatory elements
Target genes
Other information

Extended variants
information (count: 18 )
Associated
traits (count: 0)

rSNPs within LD-proxies of this variant (count:18)

rs_ID	r²[population]
rs10035484	1.00[ASN][1000 genomes]
rs153379	1.00[YRI][hapmap];1.00[AFR][1000 genomes];0.91[AMR][1000 genomes];0.94[EUR][1000 genomes];1.00[ASN][1000 genomes]
rs153380	0.86[CEU][hapmap];0.87[AMR][1000 genomes];0.94[EUR][1000 genomes];1.00[ASN][1000 genomes]
rs153429	0.91[CEU][hapmap];0.84[AMR][1000 genomes];0.90[EUR][1000 genomes];1.00[ASN][1000 genomes]
rs16892457	1.00[ASN][1000 genomes]
rs2084130	1.00[ASN][1000 genomes]
rs253531	0.95[CEU][hapmap];1.00[YRI][hapmap];0.96[AFR][1000 genomes];0.87[AMR][1000 genomes];0.90[EUR][1000 genomes];1.00[ASN][1000 genomes]
rs253533	0.91[CEU][hapmap];0.86[AMR][1000 genomes];0.90[EUR][1000 genomes];1.00[ASN][1000 genomes]
rs34404532	1.00[ASN][1000 genomes]
rs391101	1.00[ASN][1000 genomes]
rs436696	1.00[CEU][hapmap];0.87[AMR][1000 genomes];0.91[EUR][1000 genomes];1.00[ASN][1000 genomes]
rs4416552	1.00[ASN][1000 genomes]
rs4627943	1.00[ASN][1000 genomes]
rs55816286	1.00[ASN][1000 genomes]
rs62366280	1.00[ASN][1000 genomes]
rs62366281	1.00[ASN][1000 genomes]
rs72763369	1.00[ASN][1000 genomes]
rs860648	0.97[AMR][1000 genomes];0.98[EUR][1000 genomes];1.00[ASN][1000 genomes]

No data

Chromatin state (count:9 , 50 per page) page: 1

No.	Chromosome Location	Chromatin state	Cell line	Tissue
1	chr5:60997800-61015200	Weak transcription	Brain Inferior Temporal Lobe	brain
2	chr5:61012000-61013200	Enhancers	H9 Derived Neuronal Progenitor Cultured Cells	ES cell derived
3	chr5:61012000-61013200	Enhancers	H9 Derived Neuron Cultured Cells	ES cell derived
4	chr5:61012400-61012800	Enhancers	HUES48 Cell Line	embryonic stem cell
5	chr5:61012400-61013000	Enhancers	ES-I3 Cell Line	embryonic stem cell
6	chr5:61012600-61012800	Bivalent Enhancer	HSMMtube	muscle
7	chr5:61012600-61013000	Enhancers	iPS-18 Cell Line	embryonic stem cell
8	chr5:61012600-61013200	Enhancers	H9 Cell Line	embryonic stem cell
9	chr5:61012600-61013200	Enhancers	iPS-20b Cell Line	embryonic stem cell

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Input of quick search could be:

dbSNP/dbVar ID: rs12345 /nsv7879
a single nucleotide as 0-based coordinates: chr1:12345
chromosomal regions: chr1:12345-34567

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