Variant report

Variant	rs153380
Chromosome Location	chr5:61004103-61004104
allele	A/G
Outlinks	Ensembl UCSC

Chromatin state
Related regulatory elements
Target genes
Other information

Extended variants
information (count: 19 )
Associated
traits (count: 0)

rSNPs within LD-proxies of this variant (count:19)

rs_ID	r²[population]
rs10035484	1.00[ASN][1000 genomes]
rs153379	0.95[AMR][1000 genomes];1.00[EUR][1000 genomes];1.00[ASN][1000 genomes]
rs153429	0.81[CEU][hapmap];0.80[YRI][hapmap];0.82[AFR][1000 genomes];0.94[AMR][1000 genomes];0.96[EUR][1000 genomes];1.00[ASN][1000 genomes]
rs16892457	1.00[ASN][1000 genomes]
rs2084130	1.00[ASN][1000 genomes]
rs251895	0.87[AMR][1000 genomes];0.94[EUR][1000 genomes];1.00[ASN][1000 genomes]
rs253531	0.81[CEU][hapmap];1.00[CHD][hapmap];0.97[GIH][hapmap];1.00[TSI][hapmap];0.91[AMR][1000 genomes];0.96[EUR][1000 genomes];1.00[ASN][1000 genomes]
rs253533	0.81[CEU][hapmap];1.00[YRI][hapmap];0.94[AFR][1000 genomes];0.95[AMR][1000 genomes];0.96[EUR][1000 genomes];1.00[ASN][1000 genomes]
rs2937832	0.93[LWK][hapmap];1.00[YRI][hapmap];0.88[AFR][1000 genomes]
rs34404532	1.00[ASN][1000 genomes]
rs391101	1.00[CHD][hapmap];0.93[GIH][hapmap];1.00[ASN][1000 genomes]
rs436696	0.81[ASW][hapmap];0.86[CEU][hapmap];1.00[CHD][hapmap];1.00[GIH][hapmap];1.00[LWK][hapmap];1.00[MKK][hapmap];1.00[TSI][hapmap];1.00[YRI][hapmap];0.98[AFR][1000 genomes];0.97[AMR][1000 genomes];0.97[EUR][1000 genomes];1.00[ASN][1000 genomes]
rs4416552	1.00[ASN][1000 genomes]
rs4627943	1.00[ASN][1000 genomes]
rs55816286	1.00[ASN][1000 genomes]
rs62366280	1.00[ASN][1000 genomes]
rs62366281	1.00[ASN][1000 genomes]
rs72763369	1.00[ASN][1000 genomes]
rs860648	0.89[AFR][1000 genomes];0.90[AMR][1000 genomes];0.96[EUR][1000 genomes];1.00[ASN][1000 genomes]

No data

Chromatin state (count:1 , 50 per page) page: 1

No.	Chromosome Location	Chromatin state	Cell line	Tissue
1	chr5:60997800-61015200	Weak transcription	Brain Inferior Temporal Lobe	brain

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Input of quick search could be:

dbSNP/dbVar ID: rs12345 /nsv7879
a single nucleotide as 0-based coordinates: chr1:12345
chromosomal regions: chr1:12345-34567

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