Variant report

Variant rs55816286
Chromosome Location chr5:60907760-60907761
allele C/T
Outlinks Ensembl   UCSC
Chromatin state (count:24 , 50 per page) page: 1
No. Chromosome Location Chromatin state Cell line Tissue
1 chr5:60895600-60912800 Weak transcription Gastric stomach
2 chr5:60898800-60910800 Weak transcription H1 BMP4 Derived Trophoblast Cultured Cells ES cell derived
3 chr5:60903200-60909800 Weak transcription Foreskin Melanocyte Primary Cells skin01 Skin
4 chr5:60906000-60909800 Enhancers H9 Derived Neuronal Progenitor Cultured Cells ES cell derived
5 chr5:60906400-60908400 Weak transcription ES-I3 Cell Line embryonic stem cell
6 chr5:60906600-60908200 Weak transcription HUES64 Cell Line embryonic stem cell
7 chr5:60906600-60908200 Weak transcription iPS-20b Cell Line embryonic stem cell
8 chr5:60906600-60908400 Weak transcription ES-UCSF4 Cell Line embryonic stem cell
9 chr5:60906600-60921400 Weak transcription H1 Derived Neuronal Progenitor Cultured Cells ES cell derived
10 chr5:60906800-60908000 Weak transcription Cortex derived primary cultured neurospheres brain
11 chr5:60906800-60908000 Weak transcription Brain Inferior Temporal Lobe brain
12 chr5:60906800-60908000 Weak transcription Brain Dorsolateral Prefrontal Cortex brain
13 chr5:60906800-60908200 Weak transcription H1 Cell Line embryonic stem cell
14 chr5:60906800-60908400 Weak transcription Brain Angular Gyrus brain
15 chr5:60906800-60911400 Enhancers H9 Derived Neuron Cultured Cells ES cell derived
16 chr5:60906800-60921400 Weak transcription iPS DF 19.11 Cell Line embryonic stem cell
17 chr5:60907000-60908400 Weak transcription iPS-18 Cell Line embryonic stem cell
18 chr5:60907000-60908400 Weak transcription Fetal Brain Male brain
19 chr5:60907000-60909000 Enhancers Ganglion Eminence derived primary cultured neurospheres brain
20 chr5:60907000-60910800 Enhancers Brain Anterior Caudate brain
21 chr5:60907200-60908200 Weak transcription Brain Hippocampus Middle brain
22 chr5:60907400-60912000 Enhancers Brain Substantia Nigra brain
23 chr5:60907600-60908200 Weak transcription A549 lung
24 chr5:60907600-60909000 Enhancers Brain Cingulate Gyrus brain

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