Variant report

Variant	rs153429
Chromosome Location	chr5:60996240-60996241
allele	A/C
Outlinks	Ensembl UCSC

Chromatin state
Related regulatory elements
Target genes
Other information

Extended variants
information (count: 19 )
Associated
traits (count: 0)

rSNPs within LD-proxies of this variant (count:19)

rs_ID	r²[population]
rs10035484	1.00[ASN][1000 genomes]
rs153379	0.92[AMR][1000 genomes];0.96[EUR][1000 genomes];1.00[ASN][1000 genomes]
rs153380	0.81[CEU][hapmap];0.80[YRI][hapmap];0.82[AFR][1000 genomes];0.94[AMR][1000 genomes];0.96[EUR][1000 genomes];1.00[ASN][1000 genomes]
rs16892457	1.00[ASN][1000 genomes]
rs2084130	1.00[ASN][1000 genomes]
rs251895	0.84[AMR][1000 genomes];0.90[EUR][1000 genomes];1.00[ASN][1000 genomes]
rs253531	1.00[CEU][hapmap];0.94[AMR][1000 genomes];0.99[EUR][1000 genomes];1.00[ASN][1000 genomes]
rs253533	1.00[CEU][hapmap];0.82[AFR][1000 genomes];0.98[AMR][1000 genomes];0.99[EUR][1000 genomes];1.00[ASN][1000 genomes]
rs2937832	0.81[YRI][hapmap]
rs34404532	1.00[ASN][1000 genomes]
rs391101	1.00[ASN][1000 genomes]
rs436696	0.95[CEU][hapmap];0.81[YRI][hapmap];0.84[AFR][1000 genomes];0.97[AMR][1000 genomes];0.99[EUR][1000 genomes];1.00[ASN][1000 genomes]
rs4416552	1.00[ASN][1000 genomes]
rs4627943	1.00[ASN][1000 genomes]
rs55816286	1.00[ASN][1000 genomes]
rs62366280	1.00[ASN][1000 genomes]
rs62366281	1.00[ASN][1000 genomes]
rs72763369	1.00[ASN][1000 genomes]
rs860648	0.87[AMR][1000 genomes];0.92[EUR][1000 genomes];1.00[ASN][1000 genomes]

No data

Chromatin state (count:6 , 50 per page) page: 1

No.	Chromosome Location	Chromatin state	Cell line	Tissue
1	chr5:60994400-60997400	Weak transcription	Adipose Nuclei	Adipose
2	chr5:60994400-61002400	Weak transcription	Fetal Muscle Leg	muscle
3	chr5:60994800-60997400	Weak transcription	Lung	lung
4	chr5:60994800-60999400	Weak transcription	Breast variant Human Mammary Epithelial Cells (vHMEC)	Breast
5	chr5:60994800-61002600	Weak transcription	H9 Derived Neuron Cultured Cells	ES cell derived
6	chr5:60995400-60998000	Weak transcription	H9 Derived Neuronal Progenitor Cultured Cells	ES cell derived

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Input of quick search could be:

dbSNP/dbVar ID: rs12345 /nsv7879
a single nucleotide as 0-based coordinates: chr1:12345
chromosomal regions: chr1:12345-34567

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