Variant report

Variant rs2541000
Chromosome Location chr2:37240800-37240801
allele A/C
Outlinks Ensembl   UCSC
Chromatin state (count:140 , 50 per page) page: 1 2 3
No. Chromosome Location Chromatin state Cell line Tissue
1 chr2:37195200-37252800 Weak transcription Foreskin Melanocyte Primary Cells skin01 Skin
2 chr2:37195400-37248600 Weak transcription H9 Cell Line embryonic stem cell
3 chr2:37209000-37290200 Weak transcription Small Intestine intestine
4 chr2:37214200-37248400 Weak transcription H1 Cell Line embryonic stem cell
5 chr2:37219200-37256400 Weak transcription ES-WA7 Cell Line embryonic stem cell
6 chr2:37221000-37307600 Weak transcription Pancreatic Islets Pancreatic Islet
7 chr2:37223400-37282600 Weak transcription iPS-18 Cell Line embryonic stem cell
8 chr2:37223400-37300400 Strong transcription Primary T cells fromperipheralblood blood
9 chr2:37224000-37256000 Strong transcription Breast Myoepithelial Primary Cells Breast
10 chr2:37224000-37270600 Strong transcription Mesenchymal Stem Cell Derived Chondrocyte Cultured Cells embryonic stem cell
11 chr2:37224600-37248200 Weak transcription iPS-15b Cell Line embryonic stem cell
12 chr2:37226800-37256600 Weak transcription H1 Derived Neuronal Progenitor Cultured Cells ES cell derived
13 chr2:37227800-37246000 Weak transcription H1 BMP4 Derived Trophoblast Cultured Cells ES cell derived
14 chr2:37228000-37247200 Strong transcription Mesenchymal Stem Cell Derived Adipocyte Cultured Cells ES cell derived
15 chr2:37228600-37267000 Weak transcription Stomach Mucosa stomach
16 chr2:37229800-37251200 Weak transcription K562 blood
17 chr2:37230000-37242000 Weak transcription A549 lung
18 chr2:37230400-37245600 Weak transcription Spleen Spleen
19 chr2:37230400-37248400 Weak transcription Right Ventricle heart
20 chr2:37230800-37248200 Weak transcription ES-I3 Cell Line embryonic stem cell
21 chr2:37232600-37248200 Weak transcription Foreskin Fibroblast Primary Cells skin02 Skin
22 chr2:37232800-37248400 Weak transcription Psoas Muscle Psoas
23 chr2:37232800-37251000 Weak transcription Brain Substantia Nigra brain
24 chr2:37233000-37242600 Weak transcription Brain Angular Gyrus brain
25 chr2:37233000-37245600 Weak transcription Pancreas Pancrea
26 chr2:37233000-37253000 Weak transcription NHEK skin
27 chr2:37233400-37242200 Weak transcription HUVEC blood vessel
28 chr2:37233800-37245400 Weak transcription Rectal Smooth Muscle rectum
29 chr2:37234200-37241400 Strong transcription Breast variant Human Mammary Epithelial Cells (vHMEC) Breast
30 chr2:37235000-37248400 Weak transcription Aorta Aorta
31 chr2:37236800-37244200 Weak transcription Left Ventricle heart
32 chr2:37237400-37240800 Strong transcription Liver Liver
33 chr2:37237600-37241200 Strong transcription Fetal Stomach stomach
34 chr2:37237600-37255400 Strong transcription Foreskin Keratinocyte Primary Cells skin03 Skin
35 chr2:37237800-37241000 Genic enhancers Primary T helper cells PMA-I stimulated --
36 chr2:37238000-37241200 Strong transcription hESC Derived CD184+ Endoderm Cultured Cells ES cell derived
37 chr2:37238000-37248200 Strong transcription Adipose Nuclei Adipose
38 chr2:37238200-37241000 Strong transcription Rectal Mucosa Donor 31 rectum
39 chr2:37238200-37241600 Strong transcription H9 Derived Neuron Cultured Cells ES cell derived
40 chr2:37238200-37247600 Strong transcription Bone Marrow Derived Cultured Mesenchymal Stem Cells Bone marrow
41 chr2:37238200-37255200 Strong transcription Fetal Adrenal Gland Adrenal Gland
42 chr2:37238400-37247400 Strong transcription Adipose Derived Mesenchymal Stem Cell Cultured Cells ES cell derived
43 chr2:37238400-37248400 Weak transcription Right Atrium heart
44 chr2:37238400-37260800 Weak transcription H1 BMP4 Derived Mesendoderm Cultured Cells ES cell derived
45 chr2:37238600-37241200 Genic enhancers Fetal Heart heart
46 chr2:37238600-37245000 Weak transcription HUES48 Cell Line embryonic stem cell
47 chr2:37238800-37251800 Strong transcription Placenta Placenta
48 chr2:37239200-37241200 Strong transcription H9 Derived Neuronal Progenitor Cultured Cells ES cell derived
49 chr2:37239200-37241400 Strong transcription Fetal Intestine Large intestine
50 chr2:37239200-37247600 Strong transcription Muscle Satellite Cultured Cells --

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