Variant report

Variant rs2548041
Chromosome Location chr5:37354259-37354260
allele C/G/T
Outlinks Ensembl   UCSC
Chromatin state (count:125 , 50 per page) page: 1 2 3
No. Chromosome Location Chromatin state Cell line Tissue
1 chr5:37289000-37369200 Strong transcription hESC Derived CD56+ Mesoderm Cultured Cells ES cell derived
2 chr5:37296400-37365400 Strong transcription HUES64 Cell Line embryonic stem cell
3 chr5:37296400-37369000 Weak transcription Pancreatic Islets Pancreatic Islet
4 chr5:37296800-37358400 Strong transcription Placenta Placenta
5 chr5:37296800-37358600 Strong transcription iPS-20b Cell Line embryonic stem cell
6 chr5:37296800-37358600 Strong transcription Liver Liver
7 chr5:37296800-37359000 Strong transcription Mesenchymal Stem Cell Derived Chondrocyte Cultured Cells embryonic stem cell
8 chr5:37296800-37359800 Strong transcription HUES48 Cell Line embryonic stem cell
9 chr5:37296800-37359800 Strong transcription Fetal Intestine Large intestine
10 chr5:37296800-37360000 Strong transcription Adipose Nuclei Adipose
11 chr5:37296800-37364600 Strong transcription Primary monocytes fromperipheralblood blood
12 chr5:37296800-37364600 Strong transcription Dnd41 blood
13 chr5:37296800-37365600 Strong transcription HUES6 Cell Line embryonic stem cell
14 chr5:37297000-37364200 Strong transcription Breast Myoepithelial Primary Cells Breast
15 chr5:37297000-37365400 Strong transcription Foreskin Keratinocyte Primary Cells skin03 Skin
16 chr5:37297200-37358800 Strong transcription Primary T helper cells fromperipheralblood blood
17 chr5:37297400-37364600 Strong transcription Monocytes-CD14+_RO01746 blood
18 chr5:37297800-37359800 Strong transcription H9 Derived Neuron Cultured Cells ES cell derived
19 chr5:37307800-37368600 Strong transcription H9 Derived Neuronal Progenitor Cultured Cells ES cell derived
20 chr5:37308800-37365400 Strong transcription Primary hematopoietic stem cells short term culture blood
21 chr5:37311600-37365400 Strong transcription Foreskin Melanocyte Primary Cells skin03 Skin
22 chr5:37311600-37365400 Strong transcription Fetal Muscle Leg muscle
23 chr5:37318400-37359000 Strong transcription Primary hematopoietic stem cells G-CSF-mobilized Female --
24 chr5:37319000-37358400 Strong transcription Duodenum Mucosa Duodenum
25 chr5:37319200-37364600 Strong transcription Primary hematopoietic stem cells G-CSF-mobilized Male --
26 chr5:37319400-37365400 Strong transcription Fetal Adrenal Gland Adrenal Gland
27 chr5:37321600-37359600 Strong transcription Primary T cells fromperipheralblood blood
28 chr5:37322200-37360000 Strong transcription Hela-S3 cervix
29 chr5:37323200-37358800 Strong transcription Primary Natural Killer cells fromperipheralblood blood
30 chr5:37323400-37363600 Weak transcription Stomach Mucosa stomach
31 chr5:37324400-37365400 Strong transcription ES-UCSF4 Cell Line embryonic stem cell
32 chr5:37330000-37364200 Strong transcription Fetal Muscle Trunk muscle
33 chr5:37334800-37369600 Weak transcription HSMMtube muscle
34 chr5:37335200-37360000 Strong transcription iPS-18 Cell Line embryonic stem cell
35 chr5:37335400-37360000 Strong transcription Bone Marrow Derived Cultured Mesenchymal Stem Cells Bone marrow
36 chr5:37335800-37358400 Strong transcription Mesenchymal Stem Cell Derived Adipocyte Cultured Cells ES cell derived
37 chr5:37335800-37358400 Strong transcription Duodenum Smooth Muscle Duodenum
38 chr5:37337400-37356400 Weak transcription Psoas Muscle Psoas
39 chr5:37337400-37370000 Weak transcription iPS DF 6.9 Cell Line embryonic stem cell
40 chr5:37339000-37358400 Strong transcription Primary B cells from peripheral blood blood
41 chr5:37339000-37358400 Strong transcription Stomach Smooth Muscle stomach
42 chr5:37339200-37358600 Strong transcription H1 Cell Line embryonic stem cell
43 chr5:37339200-37358800 Strong transcription Cortex derived primary cultured neurospheres brain
44 chr5:37339200-37358800 Strong transcription Foreskin Fibroblast Primary Cells skin01 Skin
45 chr5:37340800-37370200 Weak transcription H1 Derived Neuronal Progenitor Cultured Cells ES cell derived
46 chr5:37341400-37356000 Weak transcription NHLF lung
47 chr5:37342600-37369000 Weak transcription Fetal Brain Male brain
48 chr5:37342800-37369600 Weak transcription ES-WA7 Cell Line embryonic stem cell
49 chr5:37345200-37358600 Strong transcription Adipose Derived Mesenchymal Stem Cell Cultured Cells ES cell derived
50 chr5:37345200-37359800 Strong transcription Primary T cells from cord blood blood

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