Variant report

No.	Distal block	Cell Line	Cell type	Cell Stage
1	chr2:171774230..171778889-chr2:171780066..171784826,7	K562	blood:

rSNPs within LD-proxies of this variant (count:22)

rs_ID	r²[population]
rs1035839	0.80[CEU][hapmap];0.81[YRI][hapmap]
rs12465006	0.85[AFR][1000 genomes];1.00[AMR][1000 genomes];1.00[EUR][1000 genomes]
rs13017649	0.80[CEU][hapmap]
rs13389859	0.80[CEU][hapmap]
rs16859087	0.80[CEU][hapmap]
rs16859121	0.80[CEU][hapmap]
rs2162574	1.00[CEU][hapmap];0.89[AFR][1000 genomes];1.00[AMR][1000 genomes];1.00[EUR][1000 genomes]
rs2356600	0.82[CEU][hapmap]
rs2676137	0.98[AFR][1000 genomes];1.00[AMR][1000 genomes];0.94[EUR][1000 genomes]
rs2676143	0.80[CEU][hapmap];0.81[YRI][hapmap]
rs2676145	0.80[CEU][hapmap]
rs2676158	0.86[AFR][1000 genomes]
rs2723250	0.82[CEU][hapmap]
rs2723253	0.80[CEU][hapmap]
rs2883940	0.80[CEU][hapmap]
rs4668342	1.00[CEU][hapmap];0.83[AFR][1000 genomes];0.93[AMR][1000 genomes];1.00[EUR][1000 genomes]
rs4668356	0.80[CEU][hapmap]
rs6433265	1.00[AFR][1000 genomes];1.00[AMR][1000 genomes];1.00[EUR][1000 genomes]
rs6736045	0.82[CEU][hapmap]
rs6753513	0.81[CEU][hapmap]
rs7608813	0.88[CEU][hapmap]
rs966181	0.83[AFR][1000 genomes]

Variant overlapped rSNPs/rCNVs (count:1 , 50 per page) page: 1

No.	Variant name	Chromosome position	Chromatin state	Related regulatory elements	Target genes	Extended variants	Associated traits
1	nsv431801	chr2:171721493-171966493	ZNF genes & repeats Strong transcription Weak transcription Active TSS Enhancers Flanking Bivalent TSS/Enh Flanking Active TSS Genic enhancers Bivalent Enhancer Transcr. at gene 5' and 3' Bivalent/Poised TSS	TF binding region CpG island Chromatin interactive region lncRNA miRNA target site	34 gene(s)	inside rSNPs	diseases

No data

Chromatin state (count:9 , 50 per page) page: 1

No.	Chromosome Location	Chromatin state	Cell line	Tissue
1	chr2:171774600-171779800	Weak transcription	Foreskin Melanocyte Primary Cells skin01	Skin
2	chr2:171774800-171779400	Weak transcription	iPS DF 19.11 Cell Line	embryonic stem cell
3	chr2:171775000-171784800	Weak transcription	Skeletal Muscle Male	skeletal muscle
4	chr2:171775400-171779600	Weak transcription	H1 BMP4 Derived Trophoblast Cultured Cells	ES cell derived
5	chr2:171776000-171779400	Weak transcription	HUES6 Cell Line	embryonic stem cell
6	chr2:171778000-171779600	Enhancers	HepG2	liver
7	chr2:171778200-171784800	Weak transcription	Right Ventricle	heart
8	chr2:171778400-171785000	Weak transcription	Right Atrium	heart
9	chr2:171778600-171780000	Weak transcription	Brain Dorsolateral Prefrontal Cortex	brain

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