Variant report

rSNPs within LD-proxies of this variant (count:25)

rs_ID	r²[population]
rs1447928	1.00[CHB][hapmap];1.00[JPT][hapmap]
rs17064044	0.85[CEU][hapmap];0.82[AMR][1000 genomes];0.87[EUR][1000 genomes]
rs17630913	0.85[CEU][hapmap];0.88[AMR][1000 genomes];0.87[EUR][1000 genomes]
rs17630955	0.85[CEU][hapmap];0.88[AMR][1000 genomes];0.87[EUR][1000 genomes]
rs2594119	0.85[CEU][hapmap]
rs55827351	0.82[AMR][1000 genomes];0.87[EUR][1000 genomes]
rs55932127	0.91[EUR][1000 genomes]
rs56259187	0.85[EUR][1000 genomes]
rs6782282	0.91[EUR][1000 genomes]
rs6807024	0.91[EUR][1000 genomes]
rs717292	0.85[CEU][hapmap];0.88[AMR][1000 genomes];0.91[EUR][1000 genomes]
rs73092711	0.88[AMR][1000 genomes];0.93[EUR][1000 genomes]
rs73092730	1.00[AFR][1000 genomes];1.00[AMR][1000 genomes];1.00[EUR][1000 genomes]
rs73097874	0.85[EUR][1000 genomes]
rs73109690	0.89[EUR][1000 genomes]
rs73109694	0.87[EUR][1000 genomes]
rs73109699	0.87[EUR][1000 genomes]
rs73111706	0.82[AMR][1000 genomes];0.87[EUR][1000 genomes]
rs73111725	0.89[EUR][1000 genomes]
rs73111728	0.89[EUR][1000 genomes]
rs73111744	0.91[EUR][1000 genomes]
rs73111751	0.91[EUR][1000 genomes]
rs73111752	0.91[EUR][1000 genomes]
rs73111756	0.93[EUR][1000 genomes]
rs7626938	0.91[EUR][1000 genomes]

Variant overlapped rSNPs/rCNVs (count:3 , 50 per page) page: 1

No.	Variant name	Chromosome position	Chromatin state	Related regulatory elements	Target genes	Extended variants	Associated traits
1	nsv534038	chr3:60781917-60993082	Enhancers Weak transcription Flanking Active TSS ZNF genes & repeats Active TSS Bivalent Enhancer Genic enhancers	TF binding region CpG island Chromatin interactive region lncRNA	1 gene(s)	inside rSNPs	diseases
2	esv2757872	chr3:60781943-61019003	ZNF genes & repeats Enhancers Weak transcription Flanking Active TSS Active TSS Bivalent Enhancer Genic enhancers	TF binding region CpG island Chromatin interactive region lncRNA	1 gene(s)	inside rSNPs	diseases
3	esv2759152	chr3:60781943-61220809	Enhancers Weak transcription Active TSS ZNF genes & repeats Flanking Active TSS Strong transcription Genic enhancers Bivalent Enhancer	TF binding region CpG island Chromatin interactive region lncRNA	1 gene(s)	inside rSNPs	diseases

No data

Chromatin state (count:1 , 50 per page) page: 1

No.	Chromosome Location	Chromatin state	Cell line	Tissue
1	chr3:60843200-60844800	Enhancers	Foreskin Melanocyte Primary Cells skin03	Skin

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