The 2.0 version of rSNPBase

Variant report

Variant rs2609867
Chromosome Location chr3:146255463-146255464
allele A/G
Outlinks Ensembl   UCSC
Chromatin state (count:115 , 50 per page) page: 1 2 3
No. Chromosome Location Chromatin state Cell line Tissue
1 chr3:146225400-146256600 Weak transcription H1 Derived Neuronal Progenitor Cultured Cells ES cell derived
2 chr3:146225400-146257000 Weak transcription Right Ventricle heart
3 chr3:146225400-146260800 Weak transcription NH-A brain
4 chr3:146225600-146258600 Weak transcription Brain Hippocampus Middle brain
5 chr3:146229000-146259600 Weak transcription Skeletal Muscle Female skeletal muscle
6 chr3:146229800-146257000 Weak transcription H1 Derived Mesenchymal Stem Cells ES cell derived
7 chr3:146231600-146257200 Weak transcription Primary T killer naive cells fromperipheralblood blood
8 chr3:146231600-146258600 Weak transcription Primary T killer memory cells from peripheral blood blood
9 chr3:146231600-146259000 Weak transcription Brain Angular Gyrus brain
10 chr3:146231600-146260800 Weak transcription Skeletal Muscle Male skeletal muscle
11 chr3:146232000-146257400 Weak transcription Primary T helper cells PMA-I stimulated --
12 chr3:146232000-146259600 Weak transcription NHDF-Ad bronchial
13 chr3:146232800-146256000 Strong transcription Foreskin Keratinocyte Primary Cells skin03 Skin
14 chr3:146233000-146259800 Weak transcription Foreskin Fibroblast Primary Cells skin02 Skin
15 chr3:146233000-146261400 Weak transcription Fetal Muscle Trunk muscle
16 chr3:146233600-146259200 Weak transcription Primary T cells effector/memory enriched fromperipheralblood blood
17 chr3:146234400-146258000 Weak transcription Primary T helper memory cells from peripheral blood 1 blood
18 chr3:146240400-146257200 Weak transcription Primary T helper memory cells from peripheral blood 2 blood
19 chr3:146241800-146258600 Weak transcription Primary T helper naive cells from peripheral blood blood
20 chr3:146244800-146258200 Weak transcription Primary T helper naive cells fromperipheralblood blood
21 chr3:146246600-146257200 Weak transcription Primary T helper cells fromperipheralblood blood
22 chr3:146247200-146260800 Weak transcription Placenta Amnion Placenta Amnion
23 chr3:146248800-146260800 Weak transcription HSMM muscle
24 chr3:146249000-146259600 Weak transcription Aorta Aorta
25 chr3:146249400-146260800 Weak transcription NHLF lung
26 chr3:146250000-146257200 Weak transcription A549 lung
27 chr3:146250600-146256600 Weak transcription H1 Cell Line embryonic stem cell
28 chr3:146250600-146256600 Weak transcription H9 Cell Line embryonic stem cell
29 chr3:146250600-146257000 Weak transcription Primary T cells from cord blood blood
30 chr3:146250600-146257400 Weak transcription Muscle Satellite Cultured Cells --
31 chr3:146250600-146257600 Weak transcription Primary T helper 17 cells PMA-I stimulated --
32 chr3:146250600-146258400 Weak transcription Primary mononuclear cells fromperipheralblood Blood
33 chr3:146250600-146259600 Weak transcription Primary T cells fromperipheralblood blood
34 chr3:146250600-146260000 Weak transcription Thymus Thymus
35 chr3:146250600-146260800 Weak transcription Fetal Kidney kidney
36 chr3:146250800-146256800 Weak transcription Primary hematopoietic stem cells blood
37 chr3:146250800-146257000 Weak transcription Foreskin Fibroblast Primary Cells skin01 Skin
38 chr3:146251000-146259200 Weak transcription Osteobl bone
39 chr3:146251400-146256800 Weak transcription ES-UCSF4 Cell Line embryonic stem cell
40 chr3:146251400-146257600 Weak transcription Primary B cells from peripheral blood blood
41 chr3:146251600-146259600 Weak transcription Colonic Mucosa Colon
42 chr3:146252000-146256600 Weak transcription Rectal Mucosa Donor 29 rectum
43 chr3:146252200-146256200 Weak transcription iPS-20b Cell Line embryonic stem cell
44 chr3:146252200-146256800 Weak transcription Rectal Mucosa Donor 31 rectum
45 chr3:146252600-146258800 Weak transcription NHEK skin
46 chr3:146252600-146259600 Weak transcription Psoas Muscle Psoas
47 chr3:146252800-146255600 Enhancers HUES64 Cell Line embryonic stem cell
48 chr3:146252800-146256000 Transcr. at gene 5' and 3' hESC Derived CD184+ Endoderm Cultured Cells ES cell derived
49 chr3:146253000-146257200 Weak transcription Primary B cells from cord blood blood
50 chr3:146253200-146256600 Enhancers Primary neutrophils fromperipheralblood blood

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Last update: Aug 31, 2015