The 2.0 version of rSNPBase

Variant report

Variant rs2622727
Chromosome Location chr3:137818390-137818391
allele C/T
Outlinks Ensembl   UCSC
Chromatin state (count:95 , 50 per page) page: 1 2
No. Chromosome Location Chromatin state Cell line Tissue
1 chr3:137781000-137833200 Weak transcription Placenta Amnion Placenta Amnion
2 chr3:137783200-137821200 Weak transcription Colonic Mucosa Colon
3 chr3:137792000-137820600 Weak transcription Esophagus oesophagus
4 chr3:137801600-137820600 Weak transcription Spleen Spleen
5 chr3:137801600-137833200 Weak transcription Brain Cingulate Gyrus brain
6 chr3:137802400-137823200 Weak transcription Monocytes-CD14+_RO01746 blood
7 chr3:137802600-137822200 Weak transcription Primary monocytes fromperipheralblood blood
8 chr3:137803200-137833200 Weak transcription Placenta Placenta
9 chr3:137803400-137820200 Weak transcription Ganglion Eminence derived primary cultured neurospheres brain
10 chr3:137803400-137822400 Weak transcription Rectal Mucosa Donor 29 rectum
11 chr3:137805200-137823400 Strong transcription Breast Myoepithelial Primary Cells Breast
12 chr3:137805200-137823400 Strong transcription Mesenchymal Stem Cell Derived Chondrocyte Cultured Cells embryonic stem cell
13 chr3:137805600-137829800 Weak transcription Sigmoid Colon Sigmoid Colon
14 chr3:137805800-137819000 Weak transcription Colon Smooth Muscle Colon
15 chr3:137805800-137820600 Weak transcription Fetal Intestine Small intestine
16 chr3:137805800-137822000 Weak transcription Skeletal Muscle Male skeletal muscle
17 chr3:137807000-137821600 Weak transcription Brain Anterior Caudate brain
18 chr3:137807000-137822200 Weak transcription Brain Hippocampus Middle brain
19 chr3:137807400-137820600 Weak transcription H1 BMP4 Derived Trophoblast Cultured Cells ES cell derived
20 chr3:137807400-137820600 Weak transcription Right Ventricle heart
21 chr3:137807600-137818600 Weak transcription iPS-18 Cell Line embryonic stem cell
22 chr3:137807600-137822000 Weak transcription Brain Dorsolateral Prefrontal Cortex brain
23 chr3:137807800-137818800 Weak transcription Pancreas Pancrea
24 chr3:137807800-137819600 Weak transcription Foreskin Keratinocyte Primary Cells skin02 Skin
25 chr3:137808000-137821200 Weak transcription HSMMtube muscle
26 chr3:137808800-137819600 Weak transcription Foreskin Keratinocyte Primary Cells skin03 Skin
27 chr3:137808800-137830800 Weak transcription NHEK skin
28 chr3:137811800-137833400 Weak transcription Fetal Brain Male brain
29 chr3:137812400-137818400 Weak transcription iPS-20b Cell Line embryonic stem cell
30 chr3:137812600-137818400 Weak transcription H1 BMP4 Derived Mesendoderm Cultured Cells ES cell derived
31 chr3:137812600-137818400 Strong transcription IMR90 fetal lung fibroblasts Cell Line lung
32 chr3:137812600-137821600 Weak transcription Brain Inferior Temporal Lobe brain
33 chr3:137812600-137833200 Weak transcription Brain Angular Gyrus brain
34 chr3:137812800-137831400 Weak transcription ES-I3 Cell Line embryonic stem cell
35 chr3:137812800-137832000 Weak transcription Brain Germinal Matrix brain
36 chr3:137813600-137821200 Weak transcription HUES48 Cell Line embryonic stem cell
37 chr3:137813600-137823600 Strong transcription H9 Derived Neuronal Progenitor Cultured Cells ES cell derived
38 chr3:137813800-137818600 Weak transcription hESC Derived CD56+ Ectoderm Cultured Cells ES cell derived
39 chr3:137813800-137819400 Weak transcription Primary hematopoietic stem cells G-CSF-mobilized Male --
40 chr3:137813800-137819400 Weak transcription Cortex derived primary cultured neurospheres brain
41 chr3:137813800-137820600 Weak transcription H9 Cell Line embryonic stem cell
42 chr3:137813800-137821200 Weak transcription Lung lung
43 chr3:137813800-137823200 Strong transcription hESC Derived CD56+ Mesoderm Cultured Cells ES cell derived
44 chr3:137813800-137824000 Strong transcription hESC Derived CD184+ Endoderm Cultured Cells ES cell derived
45 chr3:137813800-137833000 Weak transcription Primary hematopoietic stem cells G-CSF-mobilized Female --
46 chr3:137814000-137819000 Weak transcription Fetal Adrenal Gland Adrenal Gland
47 chr3:137814000-137820600 Weak transcription Duodenum Smooth Muscle Duodenum
48 chr3:137814000-137820600 Weak transcription Fetal Brain Female brain
49 chr3:137814000-137820800 Weak transcription H1 Derived Neuronal Progenitor Cultured Cells ES cell derived
50 chr3:137814000-137822000 Weak transcription Muscle Satellite Cultured Cells --

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Last update: Aug 31, 2015