The 2.0 version of rSNPBase

Variant report

Variant rs389697
Chromosome Location chr3:137787615-137787616
allele A/G
Outlinks Ensembl   UCSC
Chromatin state (count:94 , 50 per page) page: 1 2
No. Chromosome Location Chromatin state Cell line Tissue
1 chr3:137744400-137792000 Weak transcription Fetal Kidney kidney
2 chr3:137763000-137797600 Weak transcription Hela-S3 cervix
3 chr3:137767200-137791800 Weak transcription iPS DF 6.9 Cell Line embryonic stem cell
4 chr3:137772800-137792200 Strong transcription hESC Derived CD184+ Endoderm Cultured Cells ES cell derived
5 chr3:137777800-137790000 Weak transcription Brain Germinal Matrix brain
6 chr3:137778200-137800600 Weak transcription Brain Inferior Temporal Lobe brain
7 chr3:137778800-137800400 Weak transcription Sigmoid Colon Sigmoid Colon
8 chr3:137779200-137792400 Strong transcription Fetal Stomach stomach
9 chr3:137780000-137792600 Strong transcription Foreskin Melanocyte Primary Cells skin03 Skin
10 chr3:137780000-137792600 Strong transcription Fetal Muscle Trunk muscle
11 chr3:137780000-137797600 Weak transcription Primary monocytes fromperipheralblood blood
12 chr3:137780000-137813400 Weak transcription HUVEC blood vessel
13 chr3:137780400-137792400 Strong transcription Stomach Smooth Muscle stomach
14 chr3:137780600-137788000 Strong transcription Fetal Muscle Leg muscle
15 chr3:137780600-137791600 Strong transcription H1 Derived Mesenchymal Stem Cells ES cell derived
16 chr3:137780600-137811600 Weak transcription Psoas Muscle Psoas
17 chr3:137780800-137800600 Weak transcription Brain Hippocampus Middle brain
18 chr3:137781000-137833200 Weak transcription Placenta Amnion Placenta Amnion
19 chr3:137781400-137796600 Weak transcription NHEK skin
20 chr3:137781800-137791000 Strong transcription NHLF lung
21 chr3:137781800-137796200 Weak transcription Fetal Heart heart
22 chr3:137782000-137787800 Strong transcription Muscle Satellite Cultured Cells --
23 chr3:137782000-137789800 Strong transcription HSMM muscle
24 chr3:137782000-137790600 Weak transcription Skeletal Muscle Male skeletal muscle
25 chr3:137782000-137790800 Strong transcription Bone Marrow Derived Cultured Mesenchymal Stem Cells Bone marrow
26 chr3:137782000-137791400 Strong transcription Foreskin Fibroblast Primary Cells skin01 Skin
27 chr3:137782200-137791200 Strong transcription Adipose Derived Mesenchymal Stem Cell Cultured Cells ES cell derived
28 chr3:137782400-137794600 Weak transcription Duodenum Mucosa Duodenum
29 chr3:137782600-137800600 Weak transcription Placenta Placenta
30 chr3:137783000-137788000 Enhancers Stomach Mucosa stomach
31 chr3:137783000-137802000 Weak transcription Fetal Brain Female brain
32 chr3:137783200-137811600 Weak transcription Pancreatic Islets Pancreatic Islet
33 chr3:137783200-137821200 Weak transcription Colonic Mucosa Colon
34 chr3:137783400-137791400 Weak transcription iPS-15b Cell Line embryonic stem cell
35 chr3:137783800-137789600 Weak transcription Spleen Spleen
36 chr3:137783800-137797400 Weak transcription Monocytes-CD14+_RO01746 blood
37 chr3:137784200-137791600 Weak transcription Esophagus oesophagus
38 chr3:137784400-137795000 Weak transcription Ganglion Eminence derived primary cultured neurospheres brain
39 chr3:137785000-137801000 Weak transcription Rectal Mucosa Donor 31 rectum
40 chr3:137785400-137805600 Weak transcription Primary hematopoietic stem cells G-CSF-mobilized Female --
41 chr3:137785600-137788400 Strong transcription Colon Smooth Muscle Colon
42 chr3:137785600-137796200 Weak transcription Breast variant Human Mammary Epithelial Cells (vHMEC) Breast
43 chr3:137785600-137800600 Weak transcription Rectal Smooth Muscle rectum
44 chr3:137785800-137799000 Weak transcription HUES48 Cell Line embryonic stem cell
45 chr3:137786000-137787800 Strong transcription Mesenchymal Stem Cell Derived Chondrocyte Cultured Cells embryonic stem cell
46 chr3:137786000-137802000 Weak transcription H9 Cell Line embryonic stem cell
47 chr3:137786200-137789600 Weak transcription HMEC breast
48 chr3:137786200-137791800 Weak transcription HUES64 Cell Line embryonic stem cell
49 chr3:137786200-137795400 Weak transcription ES-I3 Cell Line embryonic stem cell
50 chr3:137786200-137798200 Weak transcription iPS-20b Cell Line embryonic stem cell

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Last update: Aug 31, 2015