The 2.0 version of rSNPBase

Variant report

Variant rs2622911
Chromosome Location chr1:47837404-47837405
allele A/C
Outlinks Ensembl   UCSC
Chromatin state (count:120 , 50 per page) page: 1 2 3
No. Chromosome Location Chromatin state Cell line Tissue
1 chr1:47800600-47854600 Weak transcription H1 Derived Neuronal Progenitor Cultured Cells ES cell derived
2 chr1:47801000-47838200 Weak transcription NHDF-Ad bronchial
3 chr1:47801000-47850800 Weak transcription NHEK skin
4 chr1:47801200-47839000 Weak transcription Right Ventricle heart
5 chr1:47814800-47850600 Weak transcription Aorta Aorta
6 chr1:47823000-47846400 Weak transcription Colonic Mucosa Colon
7 chr1:47824000-47851000 Weak transcription Stomach Mucosa stomach
8 chr1:47824000-47853800 Weak transcription Psoas Muscle Psoas
9 chr1:47827800-47854800 Weak transcription Primary T killer memory cells from peripheral blood blood
10 chr1:47830800-47838600 Weak transcription Primary T helper naive cells from peripheral blood blood
11 chr1:47831000-47838600 Weak transcription Primary T helper memory cells from peripheral blood 1 blood
12 chr1:47831000-47838600 Weak transcription Primary T killer naive cells fromperipheralblood blood
13 chr1:47831000-47840000 Weak transcription iPS-20b Cell Line embryonic stem cell
14 chr1:47832200-47854200 Weak transcription Esophagus oesophagus
15 chr1:47832600-47838600 Weak transcription Rectal Smooth Muscle rectum
16 chr1:47832800-47839200 Weak transcription Brain Hippocampus Middle brain
17 chr1:47833000-47840600 Weak transcription ES-UCSF4 Cell Line embryonic stem cell
18 chr1:47833200-47852000 Weak transcription Placenta Amnion Placenta Amnion
19 chr1:47833400-47844600 Weak transcription iPS-15b Cell Line embryonic stem cell
20 chr1:47833600-47854200 Weak transcription H9 Cell Line embryonic stem cell
21 chr1:47833600-47854200 Weak transcription Brain Dorsolateral Prefrontal Cortex brain
22 chr1:47833800-47842800 Strong transcription Primary B cells from peripheral blood blood
23 chr1:47834000-47838600 Strong transcription Foreskin Melanocyte Primary Cells skin03 Skin
24 chr1:47834000-47840400 Weak transcription Pancreatic Islets Pancreatic Islet
25 chr1:47834000-47847400 Strong transcription Primary T helper cells fromperipheralblood blood
26 chr1:47834000-47847600 Strong transcription Primary T regulatory cells fromperipheralblood blood
27 chr1:47834000-47847600 Strong transcription Primary hematopoietic stem cells G-CSF-mobilized Female --
28 chr1:47834000-47849200 Strong transcription H9 Derived Neuronal Progenitor Cultured Cells ES cell derived
29 chr1:47834000-47849200 Strong transcription H9 Derived Neuron Cultured Cells ES cell derived
30 chr1:47834000-47849200 Strong transcription Dnd41 blood
31 chr1:47834000-47849400 Strong transcription Primary hematopoietic stem cells G-CSF-mobilized Male --
32 chr1:47834200-47837600 Strong transcription Primary T helper 17 cells PMA-I stimulated --
33 chr1:47834200-47837600 Strong transcription Brain Angular Gyrus brain
34 chr1:47834200-47837600 Strong transcription Skeletal Muscle Male skeletal muscle
35 chr1:47834200-47839400 Strong transcription Stomach Smooth Muscle stomach
36 chr1:47834200-47840000 Strong transcription Fetal Intestine Small intestine
37 chr1:47834200-47841400 Strong transcription Adipose Nuclei Adipose
38 chr1:47834200-47841400 Strong transcription Fetal Stomach stomach
39 chr1:47834200-47841400 Strong transcription Rectal Mucosa Donor 31 rectum
40 chr1:47834200-47841600 Strong transcription Primary hematopoietic stem cells short term culture blood
41 chr1:47834200-47841600 Strong transcription Duodenum Smooth Muscle Duodenum
42 chr1:47834200-47841600 Strong transcription Fetal Muscle Trunk muscle
43 chr1:47834200-47841600 Strong transcription HUVEC blood vessel
44 chr1:47834200-47841800 Strong transcription Adipose Derived Mesenchymal Stem Cell Cultured Cells ES cell derived
45 chr1:47834200-47841800 Strong transcription Primary mononuclear cells fromperipheralblood Blood
46 chr1:47834200-47841800 Strong transcription Fetal Intestine Large intestine
47 chr1:47834200-47842400 Strong transcription hESC Derived CD184+ Endoderm Cultured Cells ES cell derived
48 chr1:47834200-47842400 Strong transcription K562 blood
49 chr1:47834200-47842800 Strong transcription Liver Liver
50 chr1:47834200-47842800 Strong transcription Placenta Placenta

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Last update: Aug 31, 2015