The 2.0 version of rSNPBase

Variant report

Variant rs2638036
Chromosome Location chr3:112302861-112302862
allele A/G
Outlinks Ensembl   UCSC
Chromatin state (count:121 , 50 per page) page: 1 2 3
No. Chromosome Location Chromatin state Cell line Tissue
1 chr3:112281800-112312000 Weak transcription H1 BMP4 Derived Trophoblast Cultured Cells ES cell derived
2 chr3:112281800-112315400 Weak transcription Pancreas Pancrea
3 chr3:112281800-112324200 Weak transcription Spleen Spleen
4 chr3:112281800-112325400 Weak transcription Gastric stomach
5 chr3:112282000-112312200 Weak transcription H9 Cell Line embryonic stem cell
6 chr3:112282000-112330400 Weak transcription H1 Derived Mesenchymal Stem Cells ES cell derived
7 chr3:112282000-112330600 Weak transcription Esophagus oesophagus
8 chr3:112282200-112303400 Weak transcription Psoas Muscle Psoas
9 chr3:112282400-112304400 Weak transcription Fetal Heart heart
10 chr3:112282400-112306600 Weak transcription Right Ventricle heart
11 chr3:112282400-112307200 Weak transcription Small Intestine intestine
12 chr3:112282400-112312400 Weak transcription Rectal Smooth Muscle rectum
13 chr3:112282400-112316800 Weak transcription Foreskin Fibroblast Primary Cells skin02 Skin
14 chr3:112282400-112322800 Weak transcription Foreskin Fibroblast Primary Cells skin01 Skin
15 chr3:112282400-112324200 Weak transcription Brain Dorsolateral Prefrontal Cortex brain
16 chr3:112282400-112340000 Weak transcription Foreskin Keratinocyte Primary Cells skin02 Skin
17 chr3:112282600-112306800 Strong transcription H9 Derived Neuron Cultured Cells ES cell derived
18 chr3:112283000-112316400 Weak transcription ES-WA7 Cell Line embryonic stem cell
19 chr3:112287600-112304000 Weak transcription HMEC breast
20 chr3:112290400-112317400 Weak transcription Placenta Amnion Placenta Amnion
21 chr3:112290600-112306400 Weak transcription Colonic Mucosa Colon
22 chr3:112290600-112315600 Weak transcription ES-UCSF4 Cell Line embryonic stem cell
23 chr3:112290800-112303200 Weak transcription Primary T helper 17 cells PMA-I stimulated --
24 chr3:112290800-112306800 Strong transcription H9 Derived Neuronal Progenitor Cultured Cells ES cell derived
25 chr3:112291600-112320600 Weak transcription NHLF lung
26 chr3:112291800-112304800 Weak transcription Skeletal Muscle Male skeletal muscle
27 chr3:112293200-112315600 Weak transcription NH-A brain
28 chr3:112293200-112318000 Weak transcription H1 Cell Line embryonic stem cell
29 chr3:112295400-112311200 Weak transcription Fetal Intestine Small intestine
30 chr3:112296200-112304600 Strong transcription Fetal Lung lung
31 chr3:112296600-112307000 Strong transcription Liver Liver
32 chr3:112296600-112309800 Strong transcription Placenta Placenta
33 chr3:112296800-112306200 Strong transcription Primary T cells from cord blood blood
34 chr3:112297200-112307400 Strong transcription Fetal Thymus thymus
35 chr3:112297800-112305400 Strong transcription Fetal Muscle Trunk muscle
36 chr3:112297800-112305800 Strong transcription Primary T helper cells PMA-I stimulated --
37 chr3:112297800-112307000 Strong transcription Rectal Mucosa Donor 29 rectum
38 chr3:112297800-112309800 Strong transcription Primary T helper cells fromperipheralblood blood
39 chr3:112298000-112306400 Strong transcription Duodenum Smooth Muscle Duodenum
40 chr3:112298200-112303600 Strong transcription hESC Derived CD184+ Endoderm Cultured Cells ES cell derived
41 chr3:112298200-112306400 Strong transcription Primary T cells fromperipheralblood blood
42 chr3:112298200-112306800 Strong transcription Foreskin Melanocyte Primary Cells skin03 Skin
43 chr3:112298400-112306800 Strong transcription Primary T regulatory cells fromperipheralblood blood
44 chr3:112298600-112304400 Strong transcription hESC Derived CD56+ Mesoderm Cultured Cells ES cell derived
45 chr3:112298600-112325200 Weak transcription H1 Derived Neuronal Progenitor Cultured Cells ES cell derived
46 chr3:112298800-112305800 Strong transcription Rectal Mucosa Donor 31 rectum
47 chr3:112298800-112335200 Weak transcription Foreskin Melanocyte Primary Cells skin01 Skin
48 chr3:112299000-112303000 Weak transcription Ganglion Eminence derived primary cultured neurospheres brain
49 chr3:112299200-112305200 Strong transcription Primary hematopoietic stem cells G-CSF-mobilized Female --
50 chr3:112299200-112311000 Weak transcription HUVEC blood vessel

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Last update: Aug 31, 2015