Variant report

Variant rs2643938
Chromosome Location chr12:26146266-26146267
allele A/G
Outlinks Ensembl   UCSC
Chromatin state (count:68 , 50 per page) page: 1 2
No. Chromosome Location Chromatin state Cell line Tissue
1 chr12:26117600-26150000 Weak transcription Hela-S3 cervix
2 chr12:26132400-26146800 Weak transcription Brain Inferior Temporal Lobe brain
3 chr12:26134200-26148000 Weak transcription H1 BMP4 Derived Trophoblast Cultured Cells ES cell derived
4 chr12:26134400-26147800 Weak transcription Foreskin Fibroblast Primary Cells skin02 Skin
5 chr12:26138400-26146800 Weak transcription Ganglion Eminence derived primary cultured neurospheres brain
6 chr12:26139200-26147400 Weak transcription Duodenum Smooth Muscle Duodenum
7 chr12:26139400-26150600 Weak transcription Brain Angular Gyrus brain
8 chr12:26139600-26160000 Weak transcription Pancreas Pancrea
9 chr12:26139800-26146800 Weak transcription Mesenchymal Stem Cell Derived Adipocyte Cultured Cells ES cell derived
10 chr12:26140200-26147600 Weak transcription Ovary ovary
11 chr12:26141800-26146800 Weak transcription hESC Derived CD56+ Mesoderm Cultured Cells ES cell derived
12 chr12:26142000-26149000 Weak transcription H9 Cell Line embryonic stem cell
13 chr12:26142200-26146400 Weak transcription Brain Cingulate Gyrus brain
14 chr12:26142200-26146400 Weak transcription Brain Hippocampus Middle brain
15 chr12:26142200-26146400 Weak transcription Fetal Stomach stomach
16 chr12:26142200-26155600 Weak transcription Pancreatic Islets Pancreatic Islet
17 chr12:26143800-26147400 Enhancers Brain Anterior Caudate brain
18 chr12:26143800-26151200 Enhancers HUES48 Cell Line embryonic stem cell
19 chr12:26143800-26151200 Enhancers iPS-15b Cell Line embryonic stem cell
20 chr12:26144000-26151200 Enhancers HUES64 Cell Line embryonic stem cell
21 chr12:26144000-26151600 Enhancers Colon Smooth Muscle Colon
22 chr12:26144400-26146600 Enhancers H1 Derived Neuronal Progenitor Cultured Cells ES cell derived
23 chr12:26144400-26148000 Enhancers Skeletal Muscle Male skeletal muscle
24 chr12:26144400-26148200 Enhancers hESC Derived CD184+ Endoderm Cultured Cells ES cell derived
25 chr12:26144400-26152200 Enhancers Breast Myoepithelial Primary Cells Breast
26 chr12:26144600-26146600 Enhancers HMEC breast
27 chr12:26144600-26147000 Enhancers Foreskin Melanocyte Primary Cells skin03 Skin
28 chr12:26144600-26148000 Enhancers ES-UCSF4 Cell Line embryonic stem cell
29 chr12:26144800-26146400 Enhancers Foreskin Fibroblast Primary Cells skin01 Skin
30 chr12:26144800-26147600 Enhancers NHDF-Ad bronchial
31 chr12:26145000-26146600 Enhancers Skeletal Muscle Female skeletal muscle
32 chr12:26145000-26146800 Enhancers Rectal Smooth Muscle rectum
33 chr12:26145000-26151400 Enhancers ES-I3 Cell Line embryonic stem cell
34 chr12:26145200-26147600 Enhancers NH-A brain
35 chr12:26145200-26148200 Enhancers Fetal Lung lung
36 chr12:26145200-26149600 Enhancers H1 Cell Line embryonic stem cell
37 chr12:26145200-26151200 Enhancers H9 Derived Neuronal Progenitor Cultured Cells ES cell derived
38 chr12:26145200-26151400 Enhancers HUES6 Cell Line embryonic stem cell
39 chr12:26145200-26152600 Enhancers Osteobl bone
40 chr12:26145400-26147200 Weak transcription HUVEC blood vessel
41 chr12:26145400-26148200 Enhancers IMR90 fetal lung fibroblasts Cell Line lung
42 chr12:26145400-26150400 Enhancers iPS-18 Cell Line embryonic stem cell
43 chr12:26145400-26150400 Enhancers iPS-20b Cell Line embryonic stem cell
44 chr12:26145400-26150600 Weak transcription Fetal Heart heart
45 chr12:26145400-26151000 Enhancers hESC Derived CD56+ Ectoderm Cultured Cells ES cell derived
46 chr12:26145600-26146600 Enhancers Aorta Aorta
47 chr12:26145600-26147600 Enhancers Adipose Derived Mesenchymal Stem Cell Cultured Cells ES cell derived
48 chr12:26145600-26147800 Enhancers Cortex derived primary cultured neurospheres brain
49 chr12:26145600-26151800 Enhancers H9 Derived Neuron Cultured Cells ES cell derived
50 chr12:26145600-26163000 Weak transcription Fetal Muscle Leg muscle

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