Variant report

Variant	rs264816
Chromosome Location	chr8:78416303-78416304
allele	G/T
Outlinks	Ensembl UCSC

Chromatin state
Related regulatory elements
Target genes
Other information

Extended variants
information (count: 85 )
Associated
traits (count: 0)

rSNPs within LD-proxies of this variant (count:76)

rs_ID	r²[population]
rs1510128	0.88[ASN][1000 genomes]
rs1688065	0.93[ASN][1000 genomes]
rs264785	0.96[ASN][1000 genomes]
rs264786	0.96[EUR][1000 genomes];0.95[ASN][1000 genomes]
rs264798	0.83[ASN][1000 genomes]
rs34384008	0.83[ASN][1000 genomes]
rs35749949	0.86[EUR][1000 genomes]
rs364875	0.94[ASN][1000 genomes]
rs365193	0.94[ASN][1000 genomes]
rs365418	0.94[ASN][1000 genomes]
rs366962	0.93[ASN][1000 genomes]
rs367335	0.93[ASN][1000 genomes]
rs373912	0.93[ASN][1000 genomes]
rs375246	0.94[ASN][1000 genomes]
rs376638	0.93[ASN][1000 genomes]
rs377046	0.92[ASN][1000 genomes]
rs379689	0.94[ASN][1000 genomes]
rs381103	0.93[ASN][1000 genomes]
rs382065	0.94[ASN][1000 genomes]
rs383723	0.93[ASN][1000 genomes]
rs384029	0.94[ASN][1000 genomes]
rs384046	0.93[ASN][1000 genomes]
rs384089	0.93[ASN][1000 genomes]
rs384686	0.86[ASN][1000 genomes]
rs386673	0.93[ASN][1000 genomes]
rs386790	0.90[ASN][1000 genomes]
rs387848	0.94[ASN][1000 genomes]
rs388962	0.93[ASN][1000 genomes]
rs390442	0.94[ASN][1000 genomes]
rs390671	0.93[ASN][1000 genomes]
rs394556	0.87[ASN][1000 genomes]
rs395867	0.92[ASN][1000 genomes]
rs399030	0.86[ASN][1000 genomes]
rs399431	0.94[ASN][1000 genomes]
rs401444	0.88[ASN][1000 genomes]
rs403035	0.93[ASN][1000 genomes]
rs403872	0.83[ASN][1000 genomes]
rs403995	0.94[ASN][1000 genomes]
rs404231	0.94[ASN][1000 genomes]
rs404615	0.93[ASN][1000 genomes]
rs407355	0.93[ASN][1000 genomes]
rs407905	0.93[ASN][1000 genomes]
rs409276	0.92[ASN][1000 genomes]
rs413303	0.93[ASN][1000 genomes]
rs414963	0.93[ASN][1000 genomes]
rs416197	0.92[ASN][1000 genomes]
rs416444	0.93[ASN][1000 genomes]
rs417681	0.88[ASN][1000 genomes]
rs417710	0.93[ASN][1000 genomes]
rs418849	0.94[ASN][1000 genomes]
rs421312	0.94[ASN][1000 genomes]
rs421431	0.92[ASN][1000 genomes]
rs421501	0.94[ASN][1000 genomes]
rs427543	0.94[ASN][1000 genomes]
rs429375	0.94[ASN][1000 genomes]
rs430455	0.94[ASN][1000 genomes]
rs431962	0.92[ASN][1000 genomes]
rs432067	0.92[ASN][1000 genomes]
rs435565	0.94[ASN][1000 genomes]
rs437262	0.93[ASN][1000 genomes]
rs440274	0.93[ASN][1000 genomes]
rs443456	0.94[ASN][1000 genomes]
rs446476	0.94[ASN][1000 genomes]
rs446931	0.94[ASN][1000 genomes]
rs447108	0.93[ASN][1000 genomes]
rs447119	0.93[ASN][1000 genomes]
rs449955	0.94[ASN][1000 genomes]
rs450428	0.94[ASN][1000 genomes]
rs452704	0.93[ASN][1000 genomes]
rs453442	0.93[ASN][1000 genomes]
rs454032	0.90[ASN][1000 genomes]
rs454824	0.94[ASN][1000 genomes]
rs597249	0.92[ASN][1000 genomes]
rs607114	0.93[ASN][1000 genomes]
rs643587	0.93[ASN][1000 genomes]
rs827480	0.91[ASN][1000 genomes]

Variant overlapped rSNPs/rCNVs (count:9 , 50 per page) page: 1

No.	Variant name	Chromosome position	Chromatin state	Related regulatory elements	Target genes	Extended variants	Associated traits
1	nsv891045	chr8:77998659-78477561	Weak transcription Enhancers Flanking Active TSS ZNF genes & repeats Active TSS Strong transcription	TF binding region CpG island Chromatin interactive region lncRNA	6 gene(s)	inside rSNPs	diseases
2	nsv891049	chr8:78325885-78565529	Weak transcription Active TSS Enhancers ZNF genes & repeats Flanking Active TSS Strong transcription	TF binding region CpG island Chromatin interactive region lncRNA	1 gene(s)	inside rSNPs	diseases
3	nsv891050	chr8:78351635-78532763	ZNF genes & repeats Weak transcription Enhancers Active TSS Strong transcription Flanking Active TSS	TF binding region CpG island Chromatin interactive region lncRNA	1 gene(s)	inside rSNPs	diseases
4	nsv831363	chr8:78367997-78522574	Enhancers ZNF genes & repeats Weak transcription Flanking Active TSS Active TSS	Chromatin interactive region lncRNA	n/a	inside rSNPs	diseases
5	nsv891051	chr8:78376314-78477561	Enhancers ZNF genes & repeats Weak transcription	lncRNA	n/a	inside rSNPs	diseases
6	nsv611567	chr8:78387243-78452222	Enhancers ZNF genes & repeats Weak transcription	lncRNA	n/a	inside rSNPs	diseases
7	nsv1033669	chr8:78414508-78704839	ZNF genes & repeats Enhancers Flanking Active TSS Active TSS Weak transcription Strong transcription	Chromatin interactive region lncRNA	n/a	inside rSNPs	diseases
8	nsv1016506	chr8:78414508-78750343	Enhancers Weak transcription Flanking Active TSS Active TSS ZNF genes & repeats Strong transcription	Chromatin interactive region lncRNA	1 gene(s)	inside rSNPs	diseases
9	nsv539650	chr8:78414508-78750343	Enhancers ZNF genes & repeats Weak transcription Flanking Active TSS Active TSS Strong transcription	Chromatin interactive region lncRNA	1 gene(s)	inside rSNPs	diseases

No data

Chromatin state (count:1 , 50 per page) page: 1

No.	Chromosome Location	Chromatin state	Cell line	Tissue
1	chr8:78416200-78416400	Enhancers	H1 Derived Neuronal Progenitor Cultured Cells	ES cell derived

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