Variant report

Variant	rs2667034
Chromosome Location	chr2:160912262-160912263
allele	A/G
Outlinks	Ensembl UCSC

Chromatin state
Related regulatory elements
Target genes
Other information

No.	Distal block	Cell Line	Cell type	Cell Stage
1	chr2:160908857..160913654-chr2:160916595..160920895,6	MCF-7	breast:

Variant related genes	Relation type
ENSG00000153246	Chromatin interaction

rs_ID	r²[population]
rs11890990	1.00[MEX][hapmap];1.00[AMR][1000 genomes]
rs2357863	1.00[MEX][hapmap]
rs2925764	1.00[MEX][hapmap]
rs2925765	1.00[MEX][hapmap]
rs2966388	1.00[MEX][hapmap]
rs59101427	1.00[AMR][1000 genomes]
rs59560069	0.92[AFR][1000 genomes]
rs6715928	1.00[AMR][1000 genomes]
rs6724949	1.00[MEX][hapmap];1.00[AMR][1000 genomes]
rs73967991	1.00[AMR][1000 genomes]
rs73968003	0.92[AFR][1000 genomes]
rs73968013	1.00[AMR][1000 genomes]
rs73968024	1.00[AMR][1000 genomes]
rs7602804	1.00[AMR][1000 genomes]
rs7606596	1.00[MEX][hapmap]
rs925408	1.00[AMR][1000 genomes]

Chromatin state (count:48 , 50 per page) page: 1

No.	Chromosome Location	Chromatin state	Cell line	Tissue
1	chr2:160881200-160913400	Weak transcription	iPS DF 19.11 Cell Line	embryonic stem cell
2	chr2:160903000-160913400	Weak transcription	H1 Derived Mesenchymal Stem Cells	ES cell derived
3	chr2:160908800-160917400	Weak transcription	NH-A	brain
4	chr2:160909000-160918200	Weak transcription	Aorta	Aorta
5	chr2:160909200-160917000	Weak transcription	HSMMtube	muscle
6	chr2:160909400-160913400	Weak transcription	Fetal Intestine Small	intestine
7	chr2:160909400-160917200	Weak transcription	Duodenum Mucosa	Duodenum
8	chr2:160909800-160913200	Weak transcription	Fetal Intestine Large	intestine
9	chr2:160909800-160917200	Weak transcription	NHEK	skin
10	chr2:160911400-160912600	Enhancers	ES-I3 Cell Line	embryonic stem cell
11	chr2:160911400-160912800	Enhancers	Rectal Smooth Muscle	rectum
12	chr2:160911400-160912800	Enhancers	NHDF-Ad	bronchial
13	chr2:160911400-160913000	Enhancers	Breast Myoepithelial Primary Cells	Breast
14	chr2:160911400-160913200	Enhancers	H1 Cell Line	embryonic stem cell
15	chr2:160911400-160914600	Enhancers	Adipose Derived Mesenchymal Stem Cell Cultured Cells	ES cell derived
16	chr2:160911400-160914800	Enhancers	Colon Smooth Muscle	Colon
17	chr2:160911600-160912400	Enhancers	HUES64 Cell Line	embryonic stem cell
18	chr2:160911600-160912400	Enhancers	Bone Marrow Derived Cultured Mesenchymal Stem Cells	Bone marrow
19	chr2:160911600-160912400	Enhancers	Fetal Kidney	kidney
20	chr2:160911600-160912400	Enhancers	Osteobl	bone
21	chr2:160911600-160912600	Enhancers	hESC Derived CD56+ Ectoderm Cultured Cells	ES cell derived
22	chr2:160911600-160912600	Enhancers	Foreskin Fibroblast Primary Cells skin02	Skin
23	chr2:160911600-160912600	Enhancers	Esophagus	oesophagus
24	chr2:160911600-160912800	Enhancers	Foreskin Keratinocyte Primary Cells skin02	Skin
25	chr2:160911600-160913200	Enhancers	iPS-15b Cell Line	embryonic stem cell
26	chr2:160911600-160913600	Enhancers	ES-WA7 Cell Line	embryonic stem cell
27	chr2:160911600-160913600	Enhancers	Foreskin Fibroblast Primary Cells skin01	Skin
28	chr2:160911600-160913800	Enhancers	ES-UCSF4 Cell Line	embryonic stem cell
29	chr2:160911600-160914200	Enhancers	iPS-18 Cell Line	embryonic stem cell
30	chr2:160911600-160914400	Enhancers	HUES6 Cell Line	embryonic stem cell
31	chr2:160911600-160914400	Enhancers	Ovary	ovary
32	chr2:160911800-160912400	Flanking Active TSS	Mesenchymal Stem Cell Derived Adipocyte Cultured Cells	ES cell derived
33	chr2:160911800-160912600	Enhancers	Foreskin Keratinocyte Primary Cells skin03	Skin
34	chr2:160911800-160912800	Enhancers	Foreskin Melanocyte Primary Cells skin03	Skin
35	chr2:160911800-160913600	Enhancers	iPS DF 6.9 Cell Line	embryonic stem cell
36	chr2:160912000-160912600	Enhancers	Foreskin Melanocyte Primary Cells skin01	Skin
37	chr2:160912000-160912600	Enhancers	Fetal Adrenal Gland	Adrenal Gland
38	chr2:160912000-160912800	Weak transcription	H9 Cell Line	embryonic stem cell
39	chr2:160912000-160918000	Weak transcription	HMEC	breast
40	chr2:160912200-160912400	Flanking Active TSS	HUES48 Cell Line	embryonic stem cell
41	chr2:160912200-160912400	Flanking Active TSS	iPS-20b Cell Line	embryonic stem cell
42	chr2:160912200-160912400	Enhancers	Mesenchymal Stem Cell Derived Chondrocyte Cultured Cells	embryonic stem cell
43	chr2:160912200-160917000	Weak transcription	Stomach Smooth Muscle	stomach
44	chr2:160912200-160917200	Weak transcription	HUVEC	blood vessel
45	chr2:160912200-160917600	Weak transcription	Muscle Satellite Cultured Cells	--
46	chr2:160912200-160917800	Weak transcription	Breast variant Human Mammary Epithelial Cells (vHMEC)	Breast
47	chr2:160912200-160917800	Weak transcription	Adipose Nuclei	Adipose
48	chr2:160912200-160917800	Weak transcription	Fetal Stomach	stomach

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