Variant report

No.	Distal block	Cell Line	Cell type	Cell Stage
1	chr4:160320966..160323361-chr4:160350586..160353397,2	K562	blood:

rSNPs within LD-proxies of this variant (count:28)

rs_ID	r²[population]
rs11100222	0.90[ASN][1000 genomes]
rs11100224	0.83[EUR][1000 genomes]
rs11100225	0.83[EUR][1000 genomes]
rs11100227	0.83[EUR][1000 genomes]
rs17306268	0.94[ASN][1000 genomes]
rs2463988	0.85[ASN][1000 genomes]
rs2699004	1.00[ASN][1000 genomes]
rs2699015	0.90[ASN][1000 genomes]
rs2699018	0.94[ASN][1000 genomes]
rs2699023	0.93[EUR][1000 genomes];0.96[ASN][1000 genomes]
rs2699024	0.96[ASN][1000 genomes]
rs2699026	1.00[ASN][1000 genomes]
rs2699030	1.00[ASN][1000 genomes]
rs2699032	0.99[AFR][1000 genomes];0.84[AMR][1000 genomes];0.95[EUR][1000 genomes];1.00[ASN][1000 genomes]
rs2699033	0.99[AFR][1000 genomes];0.84[AMR][1000 genomes];0.95[EUR][1000 genomes];1.00[ASN][1000 genomes]
rs2699038	1.00[ASN][1000 genomes]
rs2707660	0.99[AFR][1000 genomes];1.00[AMR][1000 genomes];1.00[EUR][1000 genomes];1.00[ASN][1000 genomes]
rs2707661	1.00[AFR][1000 genomes];0.84[AMR][1000 genomes];0.95[EUR][1000 genomes];1.00[ASN][1000 genomes]
rs2707665	0.94[ASN][1000 genomes]
rs4690940	1.00[AFR][1000 genomes];0.84[AMR][1000 genomes];0.95[EUR][1000 genomes];1.00[ASN][1000 genomes]
rs4690941	0.95[AFR][1000 genomes];0.89[EUR][1000 genomes];0.96[ASN][1000 genomes]
rs4691558	0.84[EUR][1000 genomes];0.94[ASN][1000 genomes]
rs4691563	0.83[EUR][1000 genomes]
rs4691564	0.81[EUR][1000 genomes]
rs9790387	0.83[EUR][1000 genomes]
rs9790451	0.89[ASN][1000 genomes]
rs9790650	0.83[EUR][1000 genomes]
rs9990950	0.83[EUR][1000 genomes]

No data

Chromatin state (count:14 , 50 per page) page: 1

No.	Chromosome Location	Chromatin state	Cell line	Tissue
1	chr4:160347600-160356800	Weak transcription	H1 BMP4 Derived Mesendoderm Cultured Cells	ES cell derived
2	chr4:160348800-160351200	Enhancers	Fetal Heart	heart
3	chr4:160349000-160356600	Weak transcription	HepG2	liver
4	chr4:160349200-160355800	Weak transcription	ES-I3 Cell Line	embryonic stem cell
5	chr4:160350200-160351200	Enhancers	HUVEC	blood vessel
6	chr4:160350200-160351200	Enhancers	NHEK	skin
7	chr4:160350400-160351400	Bivalent Enhancer	Primary hematopoietic stem cells G-CSF-mobilized Female	--
8	chr4:160350400-160351400	Bivalent Enhancer	Primary hematopoietic stem cells G-CSF-mobilized Male	--
9	chr4:160350400-160351600	Enhancers	Primary hematopoietic stem cells	blood
10	chr4:160350600-160367800	Weak transcription	HSMM	muscle
11	chr4:160350800-160354600	Weak transcription	Foreskin Keratinocyte Primary Cells skin03	Skin
12	chr4:160350800-160355400	Weak transcription	Foreskin Keratinocyte Primary Cells skin02	Skin
13	chr4:160351000-160352200	Enhancers	Foreskin Melanocyte Primary Cells skin03	Skin
14	chr4:160351000-160356000	Weak transcription	iPS-15b Cell Line	embryonic stem cell

Quick Search: