Variant report

No.	Distal block	Cell Line	Cell type	Cell Stage
1	chr4:160441080..160444317-chr4:160446730..160449120,3	K562	blood:
2	chr4:160436569..160439453-chr4:160441304..160443977,2	K562	blood:

rSNPs within LD-proxies of this variant (count:20)

rs_ID	r²[population]
rs13114272	0.86[AFR][1000 genomes];1.00[AMR][1000 genomes];0.82[EUR][1000 genomes]
rs13117819	1.00[AMR][1000 genomes];0.82[EUR][1000 genomes]
rs13145068	0.86[AFR][1000 genomes];0.89[AMR][1000 genomes]
rs1882618	0.90[AFR][1000 genomes];1.00[AMR][1000 genomes];1.00[EUR][1000 genomes]
rs1922647	1.00[AMR][1000 genomes];1.00[EUR][1000 genomes]
rs1922648	0.90[AFR][1000 genomes];1.00[AMR][1000 genomes];0.82[EUR][1000 genomes]
rs1922649	0.87[AMR][1000 genomes]
rs2244167	0.90[AFR][1000 genomes];1.00[AMR][1000 genomes];1.00[EUR][1000 genomes]
rs2707705	0.91[AFR][1000 genomes];0.86[EUR][1000 genomes]
rs28478134	1.00[EUR][1000 genomes]
rs2851775	0.94[AFR][1000 genomes];1.00[AMR][1000 genomes];1.00[EUR][1000 genomes]
rs2851776	0.90[AFR][1000 genomes];1.00[AMR][1000 genomes];1.00[EUR][1000 genomes]
rs2851783	0.87[AMR][1000 genomes];0.82[EUR][1000 genomes]
rs2851784	0.82[AFR][1000 genomes];0.87[AMR][1000 genomes];0.82[EUR][1000 genomes]
rs2851785	1.00[AMR][1000 genomes];1.00[EUR][1000 genomes]
rs2851790	0.82[AFR][1000 genomes];1.00[AMR][1000 genomes];0.82[EUR][1000 genomes]
rs2851793	0.84[AFR][1000 genomes];1.00[AMR][1000 genomes];0.82[EUR][1000 genomes]
rs34775142	0.96[AFR][1000 genomes]
rs4602451	0.82[AFR][1000 genomes];0.89[AMR][1000 genomes]
rs72701289	0.93[EUR][1000 genomes]

Variant overlapped rSNPs/rCNVs (count:2 , 50 per page) page: 1

No.	Variant name	Chromosome position	Chromatin state	Related regulatory elements	Target genes	Extended variants	Associated traits
1	nsv1015469	chr4:160389277-160841619	Enhancers Flanking Bivalent TSS/Enh Weak transcription Flanking Active TSS ZNF genes & repeats Strong transcription Genic enhancers Active TSS Bivalent Enhancer Bivalent/Poised TSS	TF binding region CpG island Chromatin interactive region lncRNA	2 gene(s)	inside rSNPs	diseases
2	nsv537316	chr4:160389277-160841619	Enhancers ZNF genes & repeats Flanking Active TSS Strong transcription Active TSS Weak transcription Bivalent Enhancer Flanking Bivalent TSS/Enh Genic enhancers Bivalent/Poised TSS	TF binding region CpG island Chromatin interactive region lncRNA	2 gene(s)	inside rSNPs	diseases

No data

Chromatin state (count:1 , 50 per page) page: 1

No.	Chromosome Location	Chromatin state	Cell line	Tissue
1	chr4:160433200-160458000	Weak transcription	Foreskin Keratinocyte Primary Cells skin03	Skin

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