Variant report

Variant	rs2736080
Chromosome Location	chr21:16291613-16291614
allele	A/G
Outlinks	Ensembl UCSC

Chromatin state
Related regulatory elements
Target genes
Other information

Extended variants
information (count: 16 )
Associated
traits (count: 0)

rSNPs within LD-proxies of this variant (count:16)

rs_ID	r²[population]
rs2142457	0.96[AMR][1000 genomes];0.95[EUR][1000 genomes];1.00[ASN][1000 genomes]
rs2179000	0.90[EUR][1000 genomes]
rs2245317	0.90[EUR][1000 genomes]
rs2245411	0.90[EUR][1000 genomes]
rs2256417	0.90[EUR][1000 genomes]
rs2403841	0.88[CHB][hapmap];1.00[JPT][hapmap];0.81[AMR][1000 genomes];0.94[EUR][1000 genomes];0.95[ASN][1000 genomes]
rs2736083	0.88[ASN][1000 genomes]
rs2739525	0.95[AMR][1000 genomes];0.98[EUR][1000 genomes];1.00[ASN][1000 genomes]
rs2739526	0.96[ASN][1000 genomes]
rs2822981	0.87[CHB][hapmap];1.00[JPT][hapmap];0.88[AMR][1000 genomes];0.97[EUR][1000 genomes];0.95[ASN][1000 genomes]
rs7276494	0.81[ASN][1000 genomes]
rs8134307	0.81[EUR][1000 genomes]
rs8134602	0.81[EUR][1000 genomes]
rs9653708	0.87[EUR][1000 genomes];0.87[ASN][1000 genomes]
rs966529	0.96[AMR][1000 genomes];0.98[EUR][1000 genomes];1.00[ASN][1000 genomes]
rs9982221	0.88[EUR][1000 genomes];0.89[ASN][1000 genomes]

No data

Chromatin state (count:6 , 50 per page) page: 1

No.	Chromosome Location	Chromatin state	Cell line	Tissue
1	chr21:16291200-16292000	Enhancers	NHDF-Ad	bronchial
2	chr21:16291200-16294200	Weak transcription	Mesenchymal Stem Cell Derived Adipocyte Cultured Cells	ES cell derived
3	chr21:16291200-16294200	Weak transcription	Adipose Derived Mesenchymal Stem Cell Cultured Cells	ES cell derived
4	chr21:16291200-16294800	Weak transcription	HSMM	muscle
5	chr21:16291200-16295200	Weak transcription	Muscle Satellite Cultured Cells	--
6	chr21:16291200-16295600	Weak transcription	Adipose Nuclei	Adipose

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Input of quick search could be:

dbSNP/dbVar ID: rs12345 /nsv7879
a single nucleotide as 0-based coordinates: chr1:12345
chromosomal regions: chr1:12345-34567

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