Variant report

Variant	rs966529
Chromosome Location	chr21:16292375-16292376
allele	A/G
Outlinks	Ensembl UCSC

Chromatin state
Related regulatory elements
Target genes
Other information

Extended variants
information (count: 19 )
Associated
traits (count: 0)

rSNPs within LD-proxies of this variant (count:19)

rs_ID	r²[population]
rs2142457	1.00[AFR][1000 genomes];1.00[AMR][1000 genomes];0.96[EUR][1000 genomes];1.00[ASN][1000 genomes]
rs2179000	0.92[EUR][1000 genomes]
rs2245317	0.91[EUR][1000 genomes]
rs2245411	0.91[EUR][1000 genomes]
rs2256417	0.91[EUR][1000 genomes]
rs2403841	0.96[CEU][hapmap];0.95[CHB][hapmap];0.95[JPT][hapmap];0.85[AMR][1000 genomes];0.95[EUR][1000 genomes];0.95[ASN][1000 genomes]
rs2736080	0.96[AMR][1000 genomes];0.98[EUR][1000 genomes];1.00[ASN][1000 genomes]
rs2736083	0.88[ASN][1000 genomes]
rs2739525	0.92[AFR][1000 genomes];0.99[AMR][1000 genomes];0.99[EUR][1000 genomes];1.00[ASN][1000 genomes]
rs2739526	0.86[AFR][1000 genomes];0.80[EUR][1000 genomes];0.96[ASN][1000 genomes]
rs2822971	0.83[CEU][hapmap]
rs2822981	1.00[CEU][hapmap];0.95[CHB][hapmap];0.95[JPT][hapmap];0.80[AFR][1000 genomes];0.92[AMR][1000 genomes];0.98[EUR][1000 genomes];0.95[ASN][1000 genomes]
rs7276494	0.81[ASN][1000 genomes]
rs7279246	0.80[EUR][1000 genomes]
rs8134307	0.82[EUR][1000 genomes]
rs8134602	0.82[EUR][1000 genomes]
rs9653708	0.89[EUR][1000 genomes];0.87[ASN][1000 genomes]
rs9982221	0.89[EUR][1000 genomes];0.89[ASN][1000 genomes]
rs9983796	0.80[EUR][1000 genomes]

No data

Chromatin state (count:6 , 50 per page) page: 1

No.	Chromosome Location	Chromatin state	Cell line	Tissue
1	chr21:16291200-16294200	Weak transcription	Mesenchymal Stem Cell Derived Adipocyte Cultured Cells	ES cell derived
2	chr21:16291200-16294200	Weak transcription	Adipose Derived Mesenchymal Stem Cell Cultured Cells	ES cell derived
3	chr21:16291200-16294800	Weak transcription	HSMM	muscle
4	chr21:16291200-16295200	Weak transcription	Muscle Satellite Cultured Cells	--
5	chr21:16291200-16295600	Weak transcription	Adipose Nuclei	Adipose
6	chr21:16292000-16295000	Weak transcription	NHDF-Ad	bronchial

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Input of quick search could be:

dbSNP/dbVar ID: rs12345 /nsv7879
a single nucleotide as 0-based coordinates: chr1:12345
chromosomal regions: chr1:12345-34567

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