Variant report

Variant	rs9983796
Chromosome Location	chr21:16271880-16271881
allele	A/C
Outlinks	Ensembl UCSC

Chromatin state
Related regulatory elements
Target genes
Other information

Extended variants
information (count: 17 )
Associated
traits (count: 0)

rSNPs within LD-proxies of this variant (count:17)

rs_ID	r²[population]
rs1002460	0.96[EUR][1000 genomes];1.00[ASN][1000 genomes]
rs1980425	0.92[AMR][1000 genomes];0.95[EUR][1000 genomes];0.97[ASN][1000 genomes]
rs2403841	0.84[EUR][1000 genomes]
rs2739525	0.81[EUR][1000 genomes]
rs2822971	0.81[EUR][1000 genomes]
rs2822972	0.82[EUR][1000 genomes];0.83[ASN][1000 genomes]
rs2822973	0.83[EUR][1000 genomes]
rs2822974	0.82[EUR][1000 genomes]
rs2822975	0.83[AMR][1000 genomes];0.92[EUR][1000 genomes]
rs2822981	0.82[EUR][1000 genomes]
rs7279246	0.99[AFR][1000 genomes];1.00[AMR][1000 genomes];1.00[EUR][1000 genomes];0.98[ASN][1000 genomes]
rs7279396	0.88[AMR][1000 genomes];0.94[EUR][1000 genomes];0.95[ASN][1000 genomes]
rs8134307	0.98[EUR][1000 genomes];0.98[ASN][1000 genomes]
rs8134602	0.89[AMR][1000 genomes];0.98[EUR][1000 genomes];0.99[ASN][1000 genomes]
rs9653708	0.90[EUR][1000 genomes]
rs966529	0.80[EUR][1000 genomes]
rs9982221	0.91[EUR][1000 genomes]

No data

Chromatin state (count:5 , 50 per page) page: 1

No.	Chromosome Location	Chromatin state	Cell line	Tissue
1	chr21:16262000-16284200	Weak transcription	Primary hematopoietic stem cells	blood
2	chr21:16266000-16272400	Weak transcription	H1 BMP4 Derived Trophoblast Cultured Cells	ES cell derived
3	chr21:16266400-16272800	Weak transcription	Sigmoid Colon	Sigmoid Colon
4	chr21:16271800-16274400	Enhancers	HMEC	breast
5	chr21:16271800-16274400	Enhancers	NH-A	brain

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Input of quick search could be:

dbSNP/dbVar ID: rs12345 /nsv7879
a single nucleotide as 0-based coordinates: chr1:12345
chromosomal regions: chr1:12345-34567

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