Variant report

Variant	rs1002460
Chromosome Location	chr21:16274444-16274445
allele	C/T
Outlinks	Ensembl UCSC

Chromatin state
Related regulatory elements
Target genes
Other information

Extended variants
information (count: 16 )
Associated
traits (count: 0)

rSNPs within LD-proxies of this variant (count:16)

rs_ID	r²[population]
rs1980425	0.92[EUR][1000 genomes];0.97[ASN][1000 genomes]
rs2245317	0.80[EUR][1000 genomes]
rs2245411	0.80[EUR][1000 genomes]
rs2256417	0.80[EUR][1000 genomes]
rs2403841	0.92[CEU][hapmap];0.82[EUR][1000 genomes]
rs2822971	0.96[CEU][hapmap]
rs2822972	0.83[EUR][1000 genomes];0.83[ASN][1000 genomes]
rs2822975	0.89[EUR][1000 genomes]
rs2822981	0.89[CEU][hapmap];0.81[EUR][1000 genomes]
rs7279246	0.96[EUR][1000 genomes];0.98[ASN][1000 genomes]
rs7279396	0.91[EUR][1000 genomes];0.95[ASN][1000 genomes]
rs8134307	0.90[AMR][1000 genomes];0.96[EUR][1000 genomes];0.98[ASN][1000 genomes]
rs8134602	0.96[EUR][1000 genomes];0.99[ASN][1000 genomes]
rs9653708	0.89[EUR][1000 genomes]
rs9982221	0.89[EUR][1000 genomes]
rs9983796	0.96[EUR][1000 genomes];1.00[ASN][1000 genomes]

No data

Chromatin state (count:5 , 50 per page) page: 1

No.	Chromosome Location	Chromatin state	Cell line	Tissue
1	chr21:16262000-16284200	Weak transcription	Primary hematopoietic stem cells	blood
2	chr21:16273200-16274600	Enhancers	Adipose Derived Mesenchymal Stem Cell Cultured Cells	ES cell derived
3	chr21:16273400-16274600	Enhancers	Primary B cells from cord blood	blood
4	chr21:16273600-16275000	Enhancers	Primary B cells from peripheral blood	blood
5	chr21:16274000-16289000	Weak transcription	HSMMtube	muscle

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Input of quick search could be:

dbSNP/dbVar ID: rs12345 /nsv7879
a single nucleotide as 0-based coordinates: chr1:12345
chromosomal regions: chr1:12345-34567

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